Protein–RNA interactions for Protein: Q8VIK3

H1foo, Histone H1oo, mousemouse

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H1fooQ8VIK3 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
H1fooQ8VIK3 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
H1fooQ8VIK3 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
H1fooQ8VIK3 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
H1fooQ8VIK3 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC15.8■□□□□ 0.12
H1fooQ8VIK3 Gm5784-201ENSMUST00000179344 2478 ntBASIC15.79■□□□□ 0.12
H1fooQ8VIK3 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
H1fooQ8VIK3 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC15.79■□□□□ 0.12
H1fooQ8VIK3 AC122335.2-201ENSMUST00000213901 6181 ntBASIC15.79■□□□□ 0.12
H1fooQ8VIK3 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
H1fooQ8VIK3 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
H1fooQ8VIK3 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
H1fooQ8VIK3 Gm26833-201ENSMUST00000180899 440 ntBASIC15.79■□□□□ 0.12
H1fooQ8VIK3 Gm27801-201ENSMUST00000184174 223 ntBASIC15.79■□□□□ 0.12
H1fooQ8VIK3 Gm43017-201ENSMUST00000198296 752 ntBASIC15.79■□□□□ 0.12
H1fooQ8VIK3 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC15.79■□□□□ 0.12
H1fooQ8VIK3 Gm40848-201ENSMUST00000221998 324 ntBASIC15.79■□□□□ 0.12
H1fooQ8VIK3 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
H1fooQ8VIK3 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
H1fooQ8VIK3 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
H1fooQ8VIK3 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
H1fooQ8VIK3 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
H1fooQ8VIK3 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
H1fooQ8VIK3 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
H1fooQ8VIK3 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
H1fooQ8VIK3 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
H1fooQ8VIK3 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
H1fooQ8VIK3 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
H1fooQ8VIK3 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
H1fooQ8VIK3 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
H1fooQ8VIK3 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
H1fooQ8VIK3 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
H1fooQ8VIK3 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
H1fooQ8VIK3 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
H1fooQ8VIK3 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
H1fooQ8VIK3 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
H1fooQ8VIK3 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
H1fooQ8VIK3 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
H1fooQ8VIK3 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
H1fooQ8VIK3 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
H1fooQ8VIK3 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
H1fooQ8VIK3 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
H1fooQ8VIK3 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC15.78■□□□□ 0.12
H1fooQ8VIK3 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
H1fooQ8VIK3 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC15.78■□□□□ 0.12
H1fooQ8VIK3 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
H1fooQ8VIK3 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
H1fooQ8VIK3 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
H1fooQ8VIK3 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
H1fooQ8VIK3 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
H1fooQ8VIK3 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
H1fooQ8VIK3 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
H1fooQ8VIK3 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
H1fooQ8VIK3 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
H1fooQ8VIK3 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
H1fooQ8VIK3 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC15.77■□□□□ 0.12
H1fooQ8VIK3 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
H1fooQ8VIK3 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC15.77■□□□□ 0.12
H1fooQ8VIK3 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
H1fooQ8VIK3 Gm5540-201ENSMUST00000131852 1848 ntBASIC15.77■□□□□ 0.11
H1fooQ8VIK3 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
H1fooQ8VIK3 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.11
H1fooQ8VIK3 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
H1fooQ8VIK3 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC15.76■□□□□ 0.11
H1fooQ8VIK3 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
H1fooQ8VIK3 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
H1fooQ8VIK3 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
H1fooQ8VIK3 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
H1fooQ8VIK3 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
H1fooQ8VIK3 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
H1fooQ8VIK3 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
H1fooQ8VIK3 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC15.76■□□□□ 0.11
H1fooQ8VIK3 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
H1fooQ8VIK3 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
H1fooQ8VIK3 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC15.76■□□□□ 0.11
H1fooQ8VIK3 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
H1fooQ8VIK3 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
H1fooQ8VIK3 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
H1fooQ8VIK3 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
H1fooQ8VIK3 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
H1fooQ8VIK3 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
H1fooQ8VIK3 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
H1fooQ8VIK3 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
H1fooQ8VIK3 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
H1fooQ8VIK3 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
H1fooQ8VIK3 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
H1fooQ8VIK3 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
H1fooQ8VIK3 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
H1fooQ8VIK3 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
H1fooQ8VIK3 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC15.75■□□□□ 0.11
H1fooQ8VIK3 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
H1fooQ8VIK3 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
H1fooQ8VIK3 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
H1fooQ8VIK3 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
H1fooQ8VIK3 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC15.75■□□□□ 0.11
H1fooQ8VIK3 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
H1fooQ8VIK3 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC15.75■□□□□ 0.11
H1fooQ8VIK3 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
H1fooQ8VIK3 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
H1fooQ8VIK3 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 49.8 ms