Protein–RNA interactions for Protein: Q8VE28

Nkd2, Protein naked cuticle homolog 2, mousemouse

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkd2Q8VE28 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Nkd2Q8VE28 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC17.18■□□□□ 0.34
Nkd2Q8VE28 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Nkd2Q8VE28 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Nkd2Q8VE28 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Nkd2Q8VE28 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Nkd2Q8VE28 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Nkd2Q8VE28 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Nkd2Q8VE28 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Nkd2Q8VE28 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Nkd2Q8VE28 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC17.17■□□□□ 0.34
Nkd2Q8VE28 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC17.17■□□□□ 0.34
Nkd2Q8VE28 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC17.17■□□□□ 0.34
Nkd2Q8VE28 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Nkd2Q8VE28 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Nkd2Q8VE28 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Nkd2Q8VE28 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC17.16■□□□□ 0.34
Nkd2Q8VE28 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Nkd2Q8VE28 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Nkd2Q8VE28 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Nkd2Q8VE28 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Nkd2Q8VE28 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Nkd2Q8VE28 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC17.16■□□□□ 0.34
Nkd2Q8VE28 Gm14281-201ENSMUST00000121700 1294 ntBASIC17.16■□□□□ 0.34
Nkd2Q8VE28 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Nkd2Q8VE28 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Nkd2Q8VE28 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Nkd2Q8VE28 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC17.16■□□□□ 0.34
Nkd2Q8VE28 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Nkd2Q8VE28 Gm10602-201ENSMUST00000098239 609 ntBASIC17.16■□□□□ 0.34
Nkd2Q8VE28 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC17.16■□□□□ 0.34
Nkd2Q8VE28 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Nkd2Q8VE28 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Nkd2Q8VE28 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC17.16■□□□□ 0.34
Nkd2Q8VE28 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Nkd2Q8VE28 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC17.15■□□□□ 0.34
Nkd2Q8VE28 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC17.15■□□□□ 0.34
Nkd2Q8VE28 Gm9988-201ENSMUST00000069786 435 ntBASIC17.15■□□□□ 0.34
Nkd2Q8VE28 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Nkd2Q8VE28 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Nkd2Q8VE28 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Nkd2Q8VE28 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Nkd2Q8VE28 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Nkd2Q8VE28 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Nkd2Q8VE28 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC17.15■□□□□ 0.34
Nkd2Q8VE28 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Nkd2Q8VE28 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Nkd2Q8VE28 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Nkd2Q8VE28 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Nkd2Q8VE28 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC17.14■□□□□ 0.33
Nkd2Q8VE28 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Nkd2Q8VE28 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Nkd2Q8VE28 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
Nkd2Q8VE28 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nkd2Q8VE28 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Nkd2Q8VE28 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nkd2Q8VE28 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
Nkd2Q8VE28 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nkd2Q8VE28 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Nkd2Q8VE28 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nkd2Q8VE28 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nkd2Q8VE28 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nkd2Q8VE28 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC17.13■□□□□ 0.33
Nkd2Q8VE28 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC17.13■□□□□ 0.33
Nkd2Q8VE28 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nkd2Q8VE28 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nkd2Q8VE28 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nkd2Q8VE28 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nkd2Q8VE28 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Nkd2Q8VE28 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Nkd2Q8VE28 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nkd2Q8VE28 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nkd2Q8VE28 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nkd2Q8VE28 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nkd2Q8VE28 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Nkd2Q8VE28 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC17.12■□□□□ 0.33
Nkd2Q8VE28 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC17.12■□□□□ 0.33
Nkd2Q8VE28 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nkd2Q8VE28 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nkd2Q8VE28 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Nkd2Q8VE28 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Nkd2Q8VE28 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Nkd2Q8VE28 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nkd2Q8VE28 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC17.12■□□□□ 0.33
Nkd2Q8VE28 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Nkd2Q8VE28 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nkd2Q8VE28 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC17.11■□□□□ 0.33
Nkd2Q8VE28 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nkd2Q8VE28 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Nkd2Q8VE28 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nkd2Q8VE28 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nkd2Q8VE28 Gm43231-201ENSMUST00000202960 2258 ntBASIC17.11■□□□□ 0.33
Nkd2Q8VE28 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nkd2Q8VE28 Gm13234-201ENSMUST00000120010 747 ntBASIC17.11■□□□□ 0.33
Nkd2Q8VE28 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Nkd2Q8VE28 Gm27011-201ENSMUST00000182352 972 ntBASIC17.11■□□□□ 0.33
Nkd2Q8VE28 Gm27801-201ENSMUST00000184174 223 ntBASIC17.11■□□□□ 0.33
Nkd2Q8VE28 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC17.11■□□□□ 0.33
Nkd2Q8VE28 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC17.11■□□□□ 0.33
Nkd2Q8VE28 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms