Protein–RNA interactions for Protein: Q8VC66

Ssx2ip, Afadin- and alpha-actinin-binding protein, mousemouse

Predictions only

Length 615 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssx2ipQ8VC66 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ssx2ipQ8VC66 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ssx2ipQ8VC66 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Ssx2ipQ8VC66 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ssx2ipQ8VC66 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ssx2ipQ8VC66 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Ssx2ipQ8VC66 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ssx2ipQ8VC66 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC19.32■□□□□ 0.68
Ssx2ipQ8VC66 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ssx2ipQ8VC66 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC19.31■□□□□ 0.68
Ssx2ipQ8VC66 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ssx2ipQ8VC66 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Ssx2ipQ8VC66 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ssx2ipQ8VC66 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Ssx2ipQ8VC66 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Ssx2ipQ8VC66 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ssx2ipQ8VC66 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ssx2ipQ8VC66 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ssx2ipQ8VC66 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ssx2ipQ8VC66 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Ssx2ipQ8VC66 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ssx2ipQ8VC66 Cdc34b-202ENSMUST00000188741 1252 ntBASIC19.3■□□□□ 0.68
Ssx2ipQ8VC66 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ssx2ipQ8VC66 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Ssx2ipQ8VC66 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Ssx2ipQ8VC66 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Ssx2ipQ8VC66 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Ssx2ipQ8VC66 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ssx2ipQ8VC66 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ssx2ipQ8VC66 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ssx2ipQ8VC66 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Ssx2ipQ8VC66 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Ssx2ipQ8VC66 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ssx2ipQ8VC66 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC19.29■□□□□ 0.68
Ssx2ipQ8VC66 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ssx2ipQ8VC66 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ssx2ipQ8VC66 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ssx2ipQ8VC66 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ssx2ipQ8VC66 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ssx2ipQ8VC66 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ssx2ipQ8VC66 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC19.29■□□□□ 0.68
Ssx2ipQ8VC66 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ssx2ipQ8VC66 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC19.29■□□□□ 0.68
Ssx2ipQ8VC66 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Ssx2ipQ8VC66 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC19.29■□□□□ 0.68
Ssx2ipQ8VC66 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Ssx2ipQ8VC66 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ssx2ipQ8VC66 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ssx2ipQ8VC66 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC19.29■□□□□ 0.68
Ssx2ipQ8VC66 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ssx2ipQ8VC66 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ssx2ipQ8VC66 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Ssx2ipQ8VC66 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ssx2ipQ8VC66 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Ssx2ipQ8VC66 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
Ssx2ipQ8VC66 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Ssx2ipQ8VC66 Gm43060-201ENSMUST00000200621 289 ntBASIC19.28■□□□□ 0.68
Ssx2ipQ8VC66 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
Ssx2ipQ8VC66 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ssx2ipQ8VC66 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ssx2ipQ8VC66 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC19.28■□□□□ 0.68
Ssx2ipQ8VC66 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ssx2ipQ8VC66 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ssx2ipQ8VC66 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ssx2ipQ8VC66 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ssx2ipQ8VC66 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ssx2ipQ8VC66 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ssx2ipQ8VC66 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ssx2ipQ8VC66 Gm42911-201ENSMUST00000199360 1630 ntBASIC19.27■□□□□ 0.68
Ssx2ipQ8VC66 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC19.27■□□□□ 0.68
Ssx2ipQ8VC66 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Ssx2ipQ8VC66 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ssx2ipQ8VC66 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Ssx2ipQ8VC66 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Ssx2ipQ8VC66 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Ssx2ipQ8VC66 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ssx2ipQ8VC66 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Ssx2ipQ8VC66 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ssx2ipQ8VC66 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ssx2ipQ8VC66 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ssx2ipQ8VC66 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC19.26■□□□□ 0.67
Ssx2ipQ8VC66 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Ssx2ipQ8VC66 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC19.26■□□□□ 0.67
Ssx2ipQ8VC66 Gm5297-201ENSMUST00000198555 1171 ntBASIC19.26■□□□□ 0.67
Ssx2ipQ8VC66 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC19.26■□□□□ 0.67
Ssx2ipQ8VC66 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Ssx2ipQ8VC66 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Ssx2ipQ8VC66 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ssx2ipQ8VC66 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ssx2ipQ8VC66 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ssx2ipQ8VC66 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ssx2ipQ8VC66 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ssx2ipQ8VC66 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ssx2ipQ8VC66 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ssx2ipQ8VC66 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Ssx2ipQ8VC66 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC19.25■□□□□ 0.67
Ssx2ipQ8VC66 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Ssx2ipQ8VC66 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Ssx2ipQ8VC66 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC19.25■□□□□ 0.67
Ssx2ipQ8VC66 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms