Protein–RNA interactions for Protein: Q8R5L3

Vps39, Vam6/Vps39-like protein, mousemouse

Predictions only

Length 886 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps39Q8R5L3 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Vps39Q8R5L3 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
Vps39Q8R5L3 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC18.92■□□□□ 0.62
Vps39Q8R5L3 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Vps39Q8R5L3 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Vps39Q8R5L3 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Vps39Q8R5L3 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Vps39Q8R5L3 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Vps39Q8R5L3 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC18.92■□□□□ 0.62
Vps39Q8R5L3 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Vps39Q8R5L3 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Vps39Q8R5L3 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Vps39Q8R5L3 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
Vps39Q8R5L3 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Vps39Q8R5L3 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Vps39Q8R5L3 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Vps39Q8R5L3 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Vps39Q8R5L3 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Vps39Q8R5L3 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Vps39Q8R5L3 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Vps39Q8R5L3 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Vps39Q8R5L3 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Vps39Q8R5L3 Gm43173-201ENSMUST00000202246 593 ntBASIC18.91■□□□□ 0.62
Vps39Q8R5L3 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Vps39Q8R5L3 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Vps39Q8R5L3 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Vps39Q8R5L3 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Vps39Q8R5L3 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC18.91■□□□□ 0.62
Vps39Q8R5L3 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
Vps39Q8R5L3 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Vps39Q8R5L3 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Vps39Q8R5L3 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Vps39Q8R5L3 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Vps39Q8R5L3 AC122335.2-201ENSMUST00000213901 6181 ntBASIC18.9■□□□□ 0.62
Vps39Q8R5L3 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Vps39Q8R5L3 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Vps39Q8R5L3 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC18.9■□□□□ 0.62
Vps39Q8R5L3 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
Vps39Q8R5L3 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Vps39Q8R5L3 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Vps39Q8R5L3 Gm27454-201ENSMUST00000185090 204 ntBASIC18.9■□□□□ 0.62
Vps39Q8R5L3 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC18.9■□□□□ 0.62
Vps39Q8R5L3 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Vps39Q8R5L3 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC18.9■□□□□ 0.62
Vps39Q8R5L3 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Vps39Q8R5L3 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Vps39Q8R5L3 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Vps39Q8R5L3 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Vps39Q8R5L3 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Vps39Q8R5L3 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Vps39Q8R5L3 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Vps39Q8R5L3 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Vps39Q8R5L3 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
Vps39Q8R5L3 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Vps39Q8R5L3 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Vps39Q8R5L3 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC18.89■□□□□ 0.61
Vps39Q8R5L3 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Vps39Q8R5L3 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Vps39Q8R5L3 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
Vps39Q8R5L3 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Vps39Q8R5L3 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Vps39Q8R5L3 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Vps39Q8R5L3 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Vps39Q8R5L3 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Vps39Q8R5L3 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Vps39Q8R5L3 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Vps39Q8R5L3 Gm27801-201ENSMUST00000184174 223 ntBASIC18.88■□□□□ 0.61
Vps39Q8R5L3 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Vps39Q8R5L3 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Vps39Q8R5L3 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Vps39Q8R5L3 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC18.88■□□□□ 0.61
Vps39Q8R5L3 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Vps39Q8R5L3 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Vps39Q8R5L3 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Vps39Q8R5L3 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Vps39Q8R5L3 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Vps39Q8R5L3 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Vps39Q8R5L3 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Vps39Q8R5L3 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Vps39Q8R5L3 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Vps39Q8R5L3 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Vps39Q8R5L3 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC18.87■□□□□ 0.61
Vps39Q8R5L3 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
Vps39Q8R5L3 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Vps39Q8R5L3 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Vps39Q8R5L3 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Vps39Q8R5L3 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Vps39Q8R5L3 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Vps39Q8R5L3 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Vps39Q8R5L3 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Vps39Q8R5L3 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Vps39Q8R5L3 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Vps39Q8R5L3 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Vps39Q8R5L3 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Vps39Q8R5L3 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Vps39Q8R5L3 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC18.86■□□□□ 0.61
Vps39Q8R5L3 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
Vps39Q8R5L3 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Vps39Q8R5L3 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Vps39Q8R5L3 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 42.6 ms