Protein–RNA interactions for Protein: Q8R4E9

Cdt1, DNA replication factor Cdt1, mousemouse

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdt1Q8R4E9 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cdt1Q8R4E9 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Cdt1Q8R4E9 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Cdt1Q8R4E9 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Cdt1Q8R4E9 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cdt1Q8R4E9 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
Cdt1Q8R4E9 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Cdt1Q8R4E9 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cdt1Q8R4E9 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Cdt1Q8R4E9 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cdt1Q8R4E9 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Cdt1Q8R4E9 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Cdt1Q8R4E9 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cdt1Q8R4E9 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cdt1Q8R4E9 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cdt1Q8R4E9 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC18.22■□□□□ 0.51
Cdt1Q8R4E9 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC18.22■□□□□ 0.51
Cdt1Q8R4E9 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC18.22■□□□□ 0.51
Cdt1Q8R4E9 Gm7514-201ENSMUST00000209475 934 ntBASIC18.22■□□□□ 0.51
Cdt1Q8R4E9 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cdt1Q8R4E9 AC154266.1-201ENSMUST00000223190 503 ntBASIC18.22■□□□□ 0.51
Cdt1Q8R4E9 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cdt1Q8R4E9 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Cdt1Q8R4E9 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Cdt1Q8R4E9 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cdt1Q8R4E9 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cdt1Q8R4E9 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cdt1Q8R4E9 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cdt1Q8R4E9 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cdt1Q8R4E9 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cdt1Q8R4E9 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Cdt1Q8R4E9 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Cdt1Q8R4E9 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cdt1Q8R4E9 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cdt1Q8R4E9 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cdt1Q8R4E9 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Cdt1Q8R4E9 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cdt1Q8R4E9 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
Cdt1Q8R4E9 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC18.21■□□□□ 0.5
Cdt1Q8R4E9 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC18.2■□□□□ 0.5
Cdt1Q8R4E9 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cdt1Q8R4E9 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Cdt1Q8R4E9 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC18.2■□□□□ 0.5
Cdt1Q8R4E9 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Cdt1Q8R4E9 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Cdt1Q8R4E9 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cdt1Q8R4E9 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cdt1Q8R4E9 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cdt1Q8R4E9 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cdt1Q8R4E9 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Cdt1Q8R4E9 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cdt1Q8R4E9 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cdt1Q8R4E9 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cdt1Q8R4E9 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cdt1Q8R4E9 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cdt1Q8R4E9 Mir5133-201ENSMUST00000174955 77 ntBASIC18.19■□□□□ 0.5
Cdt1Q8R4E9 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Cdt1Q8R4E9 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC18.19■□□□□ 0.5
Cdt1Q8R4E9 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC18.19■□□□□ 0.5
Cdt1Q8R4E9 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC18.19■□□□□ 0.5
Cdt1Q8R4E9 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Cdt1Q8R4E9 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Cdt1Q8R4E9 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cdt1Q8R4E9 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Cdt1Q8R4E9 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC18.18■□□□□ 0.5
Cdt1Q8R4E9 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC18.18■□□□□ 0.5
Cdt1Q8R4E9 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC18.18■□□□□ 0.5
Cdt1Q8R4E9 Ap3s1-204ENSMUST00000225520 957 ntBASIC18.18■□□□□ 0.5
Cdt1Q8R4E9 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cdt1Q8R4E9 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cdt1Q8R4E9 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Cdt1Q8R4E9 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Cdt1Q8R4E9 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cdt1Q8R4E9 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cdt1Q8R4E9 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Cdt1Q8R4E9 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Cdt1Q8R4E9 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC18.17■□□□□ 0.5
Cdt1Q8R4E9 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cdt1Q8R4E9 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Cdt1Q8R4E9 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cdt1Q8R4E9 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cdt1Q8R4E9 Gm22240-201ENSMUST00000175225 82 ntBASIC18.17■□□□□ 0.5
Cdt1Q8R4E9 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cdt1Q8R4E9 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cdt1Q8R4E9 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cdt1Q8R4E9 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Cdt1Q8R4E9 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC18.17■□□□□ 0.5
Cdt1Q8R4E9 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cdt1Q8R4E9 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Cdt1Q8R4E9 Golph3-205ENSMUST00000228671 2842 ntBASIC18.17■□□□□ 0.5
Cdt1Q8R4E9 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Cdt1Q8R4E9 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cdt1Q8R4E9 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cdt1Q8R4E9 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Cdt1Q8R4E9 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cdt1Q8R4E9 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Cdt1Q8R4E9 Gm45640-201ENSMUST00000210665 1896 ntBASIC18.16■□□□□ 0.5
Cdt1Q8R4E9 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Cdt1Q8R4E9 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cdt1Q8R4E9 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms