Protein–RNA interactions for Protein: Q8K2V1

Ppp4r1, Serine/threonine-protein phosphatase 4 regulatory subunit 1, mousemouse

Predictions only

Length 951 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ppp4r1Q8K2V1 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Ppp4r1Q8K2V1 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ppp4r1Q8K2V1 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ppp4r1Q8K2V1 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC19.27■□□□□ 0.68
Ppp4r1Q8K2V1 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Ppp4r1Q8K2V1 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
Ppp4r1Q8K2V1 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Ppp4r1Q8K2V1 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ppp4r1Q8K2V1 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Ppp4r1Q8K2V1 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.67
Ppp4r1Q8K2V1 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ppp4r1Q8K2V1 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ppp4r1Q8K2V1 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ppp4r1Q8K2V1 Gm37352-201ENSMUST00000193908 2181 ntBASIC19.26■□□□□ 0.67
Ppp4r1Q8K2V1 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ppp4r1Q8K2V1 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ppp4r1Q8K2V1 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Ppp4r1Q8K2V1 AC124603.1-201ENSMUST00000223843 308 ntBASIC19.26■□□□□ 0.67
Ppp4r1Q8K2V1 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ppp4r1Q8K2V1 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Ppp4r1Q8K2V1 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Ppp4r1Q8K2V1 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Ppp4r1Q8K2V1 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ppp4r1Q8K2V1 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Ppp4r1Q8K2V1 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ppp4r1Q8K2V1 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC19.25■□□□□ 0.67
Ppp4r1Q8K2V1 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ppp4r1Q8K2V1 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Ppp4r1Q8K2V1 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ppp4r1Q8K2V1 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ppp4r1Q8K2V1 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ppp4r1Q8K2V1 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Ppp4r1Q8K2V1 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Ppp4r1Q8K2V1 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ppp4r1Q8K2V1 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Ppp4r1Q8K2V1 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Ppp4r1Q8K2V1 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Ppp4r1Q8K2V1 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ppp4r1Q8K2V1 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ppp4r1Q8K2V1 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Ppp4r1Q8K2V1 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC19.25■□□□□ 0.67
Ppp4r1Q8K2V1 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Ppp4r1Q8K2V1 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ppp4r1Q8K2V1 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ppp4r1Q8K2V1 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ppp4r1Q8K2V1 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Ppp4r1Q8K2V1 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ppp4r1Q8K2V1 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ppp4r1Q8K2V1 Cdc34b-202ENSMUST00000188741 1252 ntBASIC19.24■□□□□ 0.67
Ppp4r1Q8K2V1 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ppp4r1Q8K2V1 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Ppp4r1Q8K2V1 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ppp4r1Q8K2V1 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ppp4r1Q8K2V1 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Ppp4r1Q8K2V1 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ppp4r1Q8K2V1 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Ppp4r1Q8K2V1 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ppp4r1Q8K2V1 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Ppp4r1Q8K2V1 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Ppp4r1Q8K2V1 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Ppp4r1Q8K2V1 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ppp4r1Q8K2V1 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ppp4r1Q8K2V1 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ppp4r1Q8K2V1 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
Ppp4r1Q8K2V1 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC19.23■□□□□ 0.67
Ppp4r1Q8K2V1 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ppp4r1Q8K2V1 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ppp4r1Q8K2V1 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ppp4r1Q8K2V1 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Ppp4r1Q8K2V1 AC126028.2-201ENSMUST00000228100 1833 ntBASIC19.23■□□□□ 0.67
Ppp4r1Q8K2V1 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Ppp4r1Q8K2V1 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ppp4r1Q8K2V1 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Ppp4r1Q8K2V1 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ppp4r1Q8K2V1 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ppp4r1Q8K2V1 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ppp4r1Q8K2V1 Gm43060-201ENSMUST00000200621 289 ntBASIC19.22■□□□□ 0.67
Ppp4r1Q8K2V1 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC19.22■□□□□ 0.67
Ppp4r1Q8K2V1 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ppp4r1Q8K2V1 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Ppp4r1Q8K2V1 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Ppp4r1Q8K2V1 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ppp4r1Q8K2V1 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Ppp4r1Q8K2V1 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC19.22■□□□□ 0.67
Ppp4r1Q8K2V1 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Ppp4r1Q8K2V1 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Ppp4r1Q8K2V1 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ppp4r1Q8K2V1 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ppp4r1Q8K2V1 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
Ppp4r1Q8K2V1 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ppp4r1Q8K2V1 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ppp4r1Q8K2V1 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ppp4r1Q8K2V1 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Ppp4r1Q8K2V1 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC19.21■□□□□ 0.67
Ppp4r1Q8K2V1 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC19.21■□□□□ 0.67
Ppp4r1Q8K2V1 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC19.21■□□□□ 0.67
Ppp4r1Q8K2V1 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ppp4r1Q8K2V1 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ppp4r1Q8K2V1 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ppp4r1Q8K2V1 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms