Protein–RNA interactions for Protein: Q8CGV4

Rdh1, MCG140848, mousemouse

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rdh1Q8CGV4 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rdh1Q8CGV4 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rdh1Q8CGV4 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rdh1Q8CGV4 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC18.4■□□□□ 0.54
Rdh1Q8CGV4 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rdh1Q8CGV4 Gm5540-201ENSMUST00000131852 1848 ntBASIC18.4■□□□□ 0.54
Rdh1Q8CGV4 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rdh1Q8CGV4 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Rdh1Q8CGV4 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC18.4■□□□□ 0.54
Rdh1Q8CGV4 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC18.4■□□□□ 0.54
Rdh1Q8CGV4 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rdh1Q8CGV4 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Rdh1Q8CGV4 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Rdh1Q8CGV4 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rdh1Q8CGV4 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rdh1Q8CGV4 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rdh1Q8CGV4 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Rdh1Q8CGV4 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.54
Rdh1Q8CGV4 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rdh1Q8CGV4 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC18.39■□□□□ 0.53
Rdh1Q8CGV4 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rdh1Q8CGV4 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC18.39■□□□□ 0.53
Rdh1Q8CGV4 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rdh1Q8CGV4 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rdh1Q8CGV4 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rdh1Q8CGV4 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rdh1Q8CGV4 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rdh1Q8CGV4 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Rdh1Q8CGV4 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rdh1Q8CGV4 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC18.38■□□□□ 0.53
Rdh1Q8CGV4 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Rdh1Q8CGV4 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rdh1Q8CGV4 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Rdh1Q8CGV4 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rdh1Q8CGV4 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rdh1Q8CGV4 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rdh1Q8CGV4 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rdh1Q8CGV4 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rdh1Q8CGV4 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rdh1Q8CGV4 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Rdh1Q8CGV4 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Rdh1Q8CGV4 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Rdh1Q8CGV4 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rdh1Q8CGV4 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rdh1Q8CGV4 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rdh1Q8CGV4 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
Rdh1Q8CGV4 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC18.37■□□□□ 0.53
Rdh1Q8CGV4 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Rdh1Q8CGV4 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Rdh1Q8CGV4 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rdh1Q8CGV4 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Rdh1Q8CGV4 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rdh1Q8CGV4 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rdh1Q8CGV4 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rdh1Q8CGV4 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Rdh1Q8CGV4 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rdh1Q8CGV4 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rdh1Q8CGV4 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rdh1Q8CGV4 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rdh1Q8CGV4 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rdh1Q8CGV4 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC18.36■□□□□ 0.53
Rdh1Q8CGV4 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC18.35■□□□□ 0.53
Rdh1Q8CGV4 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Rdh1Q8CGV4 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rdh1Q8CGV4 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC18.35■□□□□ 0.53
Rdh1Q8CGV4 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rdh1Q8CGV4 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rdh1Q8CGV4 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Rdh1Q8CGV4 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Rdh1Q8CGV4 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Rdh1Q8CGV4 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC18.35■□□□□ 0.53
Rdh1Q8CGV4 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC18.35■□□□□ 0.53
Rdh1Q8CGV4 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC18.35■□□□□ 0.53
Rdh1Q8CGV4 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rdh1Q8CGV4 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rdh1Q8CGV4 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Rdh1Q8CGV4 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rdh1Q8CGV4 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rdh1Q8CGV4 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rdh1Q8CGV4 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Rdh1Q8CGV4 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Rdh1Q8CGV4 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rdh1Q8CGV4 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC18.34■□□□□ 0.53
Rdh1Q8CGV4 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Rdh1Q8CGV4 Gm37563-201ENSMUST00000192580 1513 ntBASIC18.33■□□□□ 0.53
Rdh1Q8CGV4 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Rdh1Q8CGV4 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC18.33■□□□□ 0.53
Rdh1Q8CGV4 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Rdh1Q8CGV4 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Rdh1Q8CGV4 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.53
Rdh1Q8CGV4 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
Rdh1Q8CGV4 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Rdh1Q8CGV4 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
Rdh1Q8CGV4 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Rdh1Q8CGV4 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Rdh1Q8CGV4 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Rdh1Q8CGV4 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Rdh1Q8CGV4 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rdh1Q8CGV4 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC18.33■□□□□ 0.52
Rdh1Q8CGV4 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC18.33■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms