Protein–RNA interactions for Protein: Q8CDY9

Pcdhb7, Protocadherin beta 7, mousemouse

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb7Q8CDY9 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Pcdhb7Q8CDY9 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Pcdhb7Q8CDY9 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Pcdhb7Q8CDY9 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Pcdhb7Q8CDY9 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Pcdhb7Q8CDY9 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
Pcdhb7Q8CDY9 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Pcdhb7Q8CDY9 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC18.89■□□□□ 0.61
Pcdhb7Q8CDY9 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
Pcdhb7Q8CDY9 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
Pcdhb7Q8CDY9 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Pcdhb7Q8CDY9 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Pcdhb7Q8CDY9 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Pcdhb7Q8CDY9 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Pcdhb7Q8CDY9 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Pcdhb7Q8CDY9 AC126028.2-201ENSMUST00000228100 1833 ntBASIC18.88■□□□□ 0.61
Pcdhb7Q8CDY9 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Pcdhb7Q8CDY9 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pcdhb7Q8CDY9 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pcdhb7Q8CDY9 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pcdhb7Q8CDY9 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Pcdhb7Q8CDY9 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pcdhb7Q8CDY9 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pcdhb7Q8CDY9 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pcdhb7Q8CDY9 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pcdhb7Q8CDY9 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pcdhb7Q8CDY9 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pcdhb7Q8CDY9 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pcdhb7Q8CDY9 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pcdhb7Q8CDY9 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pcdhb7Q8CDY9 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Pcdhb7Q8CDY9 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pcdhb7Q8CDY9 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Pcdhb7Q8CDY9 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Pcdhb7Q8CDY9 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Pcdhb7Q8CDY9 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC18.87■□□□□ 0.61
Pcdhb7Q8CDY9 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Pcdhb7Q8CDY9 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Pcdhb7Q8CDY9 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Pcdhb7Q8CDY9 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC18.87■□□□□ 0.61
Pcdhb7Q8CDY9 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Pcdhb7Q8CDY9 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC18.87■□□□□ 0.61
Pcdhb7Q8CDY9 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Pcdhb7Q8CDY9 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Pcdhb7Q8CDY9 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Pcdhb7Q8CDY9 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Pcdhb7Q8CDY9 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pcdhb7Q8CDY9 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Pcdhb7Q8CDY9 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pcdhb7Q8CDY9 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
Pcdhb7Q8CDY9 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Pcdhb7Q8CDY9 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Pcdhb7Q8CDY9 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pcdhb7Q8CDY9 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC18.86■□□□□ 0.61
Pcdhb7Q8CDY9 Gm40848-201ENSMUST00000221998 324 ntBASIC18.86■□□□□ 0.61
Pcdhb7Q8CDY9 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Pcdhb7Q8CDY9 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Pcdhb7Q8CDY9 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pcdhb7Q8CDY9 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pcdhb7Q8CDY9 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pcdhb7Q8CDY9 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Pcdhb7Q8CDY9 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pcdhb7Q8CDY9 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Pcdhb7Q8CDY9 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Pcdhb7Q8CDY9 Gm45640-201ENSMUST00000210665 1896 ntBASIC18.86■□□□□ 0.61
Pcdhb7Q8CDY9 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Pcdhb7Q8CDY9 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pcdhb7Q8CDY9 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pcdhb7Q8CDY9 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pcdhb7Q8CDY9 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pcdhb7Q8CDY9 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Pcdhb7Q8CDY9 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Pcdhb7Q8CDY9 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pcdhb7Q8CDY9 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Pcdhb7Q8CDY9 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pcdhb7Q8CDY9 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pcdhb7Q8CDY9 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
Pcdhb7Q8CDY9 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Pcdhb7Q8CDY9 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Pcdhb7Q8CDY9 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pcdhb7Q8CDY9 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pcdhb7Q8CDY9 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Pcdhb7Q8CDY9 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Pcdhb7Q8CDY9 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC18.85■□□□□ 0.61
Pcdhb7Q8CDY9 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC18.85■□□□□ 0.61
Pcdhb7Q8CDY9 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Pcdhb7Q8CDY9 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pcdhb7Q8CDY9 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pcdhb7Q8CDY9 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC18.84■□□□□ 0.61
Pcdhb7Q8CDY9 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pcdhb7Q8CDY9 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
Pcdhb7Q8CDY9 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pcdhb7Q8CDY9 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pcdhb7Q8CDY9 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Pcdhb7Q8CDY9 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC18.84■□□□□ 0.61
Pcdhb7Q8CDY9 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pcdhb7Q8CDY9 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pcdhb7Q8CDY9 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pcdhb7Q8CDY9 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pcdhb7Q8CDY9 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms