Protein–RNA interactions for Protein: Q8CC35

Synpo, Synaptopodin, mousemouse

Known RBP Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SynpoQ8CC35 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
SynpoQ8CC35 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC18.2■□□□□ 0.5
SynpoQ8CC35 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
SynpoQ8CC35 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
SynpoQ8CC35 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SynpoQ8CC35 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC18.2■□□□□ 0.5
SynpoQ8CC35 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SynpoQ8CC35 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SynpoQ8CC35 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
SynpoQ8CC35 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SynpoQ8CC35 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SynpoQ8CC35 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC18.19■□□□□ 0.5
SynpoQ8CC35 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC18.19■□□□□ 0.5
SynpoQ8CC35 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC18.19■□□□□ 0.5
SynpoQ8CC35 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SynpoQ8CC35 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SynpoQ8CC35 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
SynpoQ8CC35 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SynpoQ8CC35 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SynpoQ8CC35 Gm14281-201ENSMUST00000121700 1294 ntBASIC18.19■□□□□ 0.5
SynpoQ8CC35 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
SynpoQ8CC35 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC18.19■□□□□ 0.5
SynpoQ8CC35 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SynpoQ8CC35 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SynpoQ8CC35 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SynpoQ8CC35 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
SynpoQ8CC35 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
SynpoQ8CC35 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SynpoQ8CC35 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
SynpoQ8CC35 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC18.19■□□□□ 0.5
SynpoQ8CC35 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SynpoQ8CC35 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SynpoQ8CC35 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SynpoQ8CC35 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
SynpoQ8CC35 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SynpoQ8CC35 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SynpoQ8CC35 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SynpoQ8CC35 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SynpoQ8CC35 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
SynpoQ8CC35 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SynpoQ8CC35 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SynpoQ8CC35 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SynpoQ8CC35 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
SynpoQ8CC35 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SynpoQ8CC35 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
SynpoQ8CC35 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC18.17■□□□□ 0.5
SynpoQ8CC35 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC18.17■□□□□ 0.5
SynpoQ8CC35 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
SynpoQ8CC35 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SynpoQ8CC35 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SynpoQ8CC35 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC18.17■□□□□ 0.5
SynpoQ8CC35 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC18.17■□□□□ 0.5
SynpoQ8CC35 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC18.17■□□□□ 0.5
SynpoQ8CC35 Spcs1-207ENSMUST00000228767 1008 ntBASIC18.17■□□□□ 0.5
SynpoQ8CC35 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
SynpoQ8CC35 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
SynpoQ8CC35 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
SynpoQ8CC35 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
SynpoQ8CC35 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SynpoQ8CC35 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SynpoQ8CC35 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
SynpoQ8CC35 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
SynpoQ8CC35 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SynpoQ8CC35 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC18.16■□□□□ 0.5
SynpoQ8CC35 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SynpoQ8CC35 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC18.16■□□□□ 0.5
SynpoQ8CC35 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
SynpoQ8CC35 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SynpoQ8CC35 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
SynpoQ8CC35 Gm5112-201ENSMUST00000204407 2368 ntBASIC18.16■□□□□ 0.5
SynpoQ8CC35 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
SynpoQ8CC35 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC18.16■□□□□ 0.5
SynpoQ8CC35 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SynpoQ8CC35 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SynpoQ8CC35 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SynpoQ8CC35 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
SynpoQ8CC35 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC18.15■□□□□ 0.5
SynpoQ8CC35 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC18.15■□□□□ 0.5
SynpoQ8CC35 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SynpoQ8CC35 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC18.15■□□□□ 0.5
SynpoQ8CC35 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SynpoQ8CC35 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SynpoQ8CC35 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SynpoQ8CC35 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SynpoQ8CC35 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
SynpoQ8CC35 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SynpoQ8CC35 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
SynpoQ8CC35 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SynpoQ8CC35 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SynpoQ8CC35 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
SynpoQ8CC35 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
SynpoQ8CC35 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
SynpoQ8CC35 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SynpoQ8CC35 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
SynpoQ8CC35 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SynpoQ8CC35 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC18.14■□□□□ 0.49
SynpoQ8CC35 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
SynpoQ8CC35 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SynpoQ8CC35 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
SynpoQ8CC35 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 47.8 ms