Protein–RNA interactions for Protein: Q8CA03

Slc46a2, Thymic stromal cotransporter protein, mousemouse

Predictions only

Length 479 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc46a2Q8CA03 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Slc46a2Q8CA03 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Slc46a2Q8CA03 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Slc46a2Q8CA03 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Slc46a2Q8CA03 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Slc46a2Q8CA03 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Slc46a2Q8CA03 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Slc46a2Q8CA03 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Slc46a2Q8CA03 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Slc46a2Q8CA03 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Slc46a2Q8CA03 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Slc46a2Q8CA03 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Slc46a2Q8CA03 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Slc46a2Q8CA03 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Slc46a2Q8CA03 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Slc46a2Q8CA03 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Slc46a2Q8CA03 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Slc46a2Q8CA03 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Slc46a2Q8CA03 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC18.12■□□□□ 0.49
Slc46a2Q8CA03 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Slc46a2Q8CA03 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC18.12■□□□□ 0.49
Slc46a2Q8CA03 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Slc46a2Q8CA03 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Slc46a2Q8CA03 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Slc46a2Q8CA03 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Slc46a2Q8CA03 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Slc46a2Q8CA03 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Slc46a2Q8CA03 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC18.11■□□□□ 0.49
Slc46a2Q8CA03 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Slc46a2Q8CA03 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Slc46a2Q8CA03 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Slc46a2Q8CA03 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Slc46a2Q8CA03 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Slc46a2Q8CA03 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Slc46a2Q8CA03 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC18.1■□□□□ 0.49
Slc46a2Q8CA03 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
Slc46a2Q8CA03 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Slc46a2Q8CA03 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Slc46a2Q8CA03 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Slc46a2Q8CA03 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Slc46a2Q8CA03 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Slc46a2Q8CA03 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Slc46a2Q8CA03 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Slc46a2Q8CA03 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Slc46a2Q8CA03 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC18.1■□□□□ 0.49
Slc46a2Q8CA03 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC18.1■□□□□ 0.49
Slc46a2Q8CA03 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Slc46a2Q8CA03 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC18.1■□□□□ 0.49
Slc46a2Q8CA03 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Slc46a2Q8CA03 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Slc46a2Q8CA03 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Slc46a2Q8CA03 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Slc46a2Q8CA03 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Slc46a2Q8CA03 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Slc46a2Q8CA03 Gm22238-201ENSMUST00000175222 88 ntBASIC18.09■□□□□ 0.49
Slc46a2Q8CA03 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC18.09■□□□□ 0.49
Slc46a2Q8CA03 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Slc46a2Q8CA03 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Slc46a2Q8CA03 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Slc46a2Q8CA03 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Slc46a2Q8CA03 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Slc46a2Q8CA03 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Slc46a2Q8CA03 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Slc46a2Q8CA03 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Slc46a2Q8CA03 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Slc46a2Q8CA03 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Slc46a2Q8CA03 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Slc46a2Q8CA03 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Slc46a2Q8CA03 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Slc46a2Q8CA03 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Slc46a2Q8CA03 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Slc46a2Q8CA03 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Slc46a2Q8CA03 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC18.08■□□□□ 0.48
Slc46a2Q8CA03 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC18.08■□□□□ 0.48
Slc46a2Q8CA03 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Slc46a2Q8CA03 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Slc46a2Q8CA03 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Slc46a2Q8CA03 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Slc46a2Q8CA03 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Slc46a2Q8CA03 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Slc46a2Q8CA03 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Slc46a2Q8CA03 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Slc46a2Q8CA03 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC18.07■□□□□ 0.48
Slc46a2Q8CA03 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Slc46a2Q8CA03 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC18.07■□□□□ 0.48
Slc46a2Q8CA03 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Slc46a2Q8CA03 Dapk1-207ENSMUST00000226059 5009 ntBASIC18.07■□□□□ 0.48
Slc46a2Q8CA03 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC18.07■□□□□ 0.48
Slc46a2Q8CA03 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC18.07■□□□□ 0.48
Slc46a2Q8CA03 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Slc46a2Q8CA03 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Slc46a2Q8CA03 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Slc46a2Q8CA03 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Slc46a2Q8CA03 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Slc46a2Q8CA03 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Slc46a2Q8CA03 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Slc46a2Q8CA03 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Slc46a2Q8CA03 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Slc46a2Q8CA03 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Slc46a2Q8CA03 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC18.06■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 39.7 ms