Protein–RNA interactions for Protein: Q8C8C1

Rtp1, Receptor-transporting protein 1, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtp1Q8C8C1 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Rtp1Q8C8C1 Gm2399-201ENSMUST00000104944 225 ntBASIC21.71■■□□□ 1.07
Rtp1Q8C8C1 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC21.71■■□□□ 1.07
Rtp1Q8C8C1 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
Rtp1Q8C8C1 Gm44549-201ENSMUST00000208351 577 ntBASIC21.71■■□□□ 1.07
Rtp1Q8C8C1 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Rtp1Q8C8C1 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Rtp1Q8C8C1 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
Rtp1Q8C8C1 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Rtp1Q8C8C1 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC21.7■■□□□ 1.06
Rtp1Q8C8C1 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC21.7■■□□□ 1.06
Rtp1Q8C8C1 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Rtp1Q8C8C1 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
Rtp1Q8C8C1 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Rtp1Q8C8C1 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Rtp1Q8C8C1 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Rtp1Q8C8C1 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC21.7■■□□□ 1.06
Rtp1Q8C8C1 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Rtp1Q8C8C1 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Rtp1Q8C8C1 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Rtp1Q8C8C1 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC21.69■■□□□ 1.06
Rtp1Q8C8C1 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC21.69■■□□□ 1.06
Rtp1Q8C8C1 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC21.69■■□□□ 1.06
Rtp1Q8C8C1 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Rtp1Q8C8C1 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Rtp1Q8C8C1 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Rtp1Q8C8C1 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Rtp1Q8C8C1 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC21.69■■□□□ 1.06
Rtp1Q8C8C1 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Rtp1Q8C8C1 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Rtp1Q8C8C1 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Rtp1Q8C8C1 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
Rtp1Q8C8C1 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Rtp1Q8C8C1 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Rtp1Q8C8C1 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Rtp1Q8C8C1 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
Rtp1Q8C8C1 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Rtp1Q8C8C1 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC21.68■■□□□ 1.06
Rtp1Q8C8C1 Gm6433-201ENSMUST00000118634 875 ntBASIC21.68■■□□□ 1.06
Rtp1Q8C8C1 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC21.68■■□□□ 1.06
Rtp1Q8C8C1 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
Rtp1Q8C8C1 H2-K2-201ENSMUST00000174250 1049 ntBASIC21.68■■□□□ 1.06
Rtp1Q8C8C1 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC21.68■■□□□ 1.06
Rtp1Q8C8C1 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Rtp1Q8C8C1 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC21.68■■□□□ 1.06
Rtp1Q8C8C1 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC21.68■■□□□ 1.06
Rtp1Q8C8C1 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Rtp1Q8C8C1 Gm10167-201ENSMUST00000150411 1479 ntBASIC21.68■■□□□ 1.06
Rtp1Q8C8C1 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Rtp1Q8C8C1 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Rtp1Q8C8C1 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Rtp1Q8C8C1 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Rtp1Q8C8C1 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Rtp1Q8C8C1 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC21.67■■□□□ 1.06
Rtp1Q8C8C1 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
Rtp1Q8C8C1 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
Rtp1Q8C8C1 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC21.67■■□□□ 1.06
Rtp1Q8C8C1 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC21.67■■□□□ 1.06
Rtp1Q8C8C1 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Rtp1Q8C8C1 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Rtp1Q8C8C1 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC21.67■■□□□ 1.06
Rtp1Q8C8C1 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
Rtp1Q8C8C1 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Rtp1Q8C8C1 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Rtp1Q8C8C1 Mir5122-201ENSMUST00000175004 89 ntBASIC21.66■■□□□ 1.06
Rtp1Q8C8C1 Gm21362-201ENSMUST00000194272 928 ntBASIC21.66■■□□□ 1.06
Rtp1Q8C8C1 Gm43799-201ENSMUST00000201845 579 ntBASIC21.66■■□□□ 1.06
Rtp1Q8C8C1 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Rtp1Q8C8C1 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
Rtp1Q8C8C1 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Rtp1Q8C8C1 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Rtp1Q8C8C1 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC21.66■■□□□ 1.06
Rtp1Q8C8C1 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Rtp1Q8C8C1 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Rtp1Q8C8C1 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Rtp1Q8C8C1 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Rtp1Q8C8C1 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Rtp1Q8C8C1 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Rtp1Q8C8C1 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Rtp1Q8C8C1 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
Rtp1Q8C8C1 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Rtp1Q8C8C1 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Rtp1Q8C8C1 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Rtp1Q8C8C1 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Rtp1Q8C8C1 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Rtp1Q8C8C1 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.06
Rtp1Q8C8C1 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Rtp1Q8C8C1 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.06
Rtp1Q8C8C1 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Rtp1Q8C8C1 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Rtp1Q8C8C1 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
Rtp1Q8C8C1 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Rtp1Q8C8C1 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Rtp1Q8C8C1 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Rtp1Q8C8C1 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Rtp1Q8C8C1 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC21.63■■□□□ 1.05
Rtp1Q8C8C1 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Rtp1Q8C8C1 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC21.63■■□□□ 1.05
Rtp1Q8C8C1 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC21.63■■□□□ 1.05
Rtp1Q8C8C1 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC21.63■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 15 ms