Protein–RNA interactions for Protein: Q8C1Q6

Smim4, Small integral membrane protein 4, mousemouse

Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim4Q8C1Q6 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Smim4Q8C1Q6 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Smim4Q8C1Q6 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC15.81■□□□□ 0.12
Smim4Q8C1Q6 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
Smim4Q8C1Q6 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Smim4Q8C1Q6 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Smim4Q8C1Q6 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC15.8■□□□□ 0.12
Smim4Q8C1Q6 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Smim4Q8C1Q6 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC15.8■□□□□ 0.12
Smim4Q8C1Q6 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Smim4Q8C1Q6 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Smim4Q8C1Q6 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Smim4Q8C1Q6 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Smim4Q8C1Q6 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Smim4Q8C1Q6 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Smim4Q8C1Q6 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC15.8■□□□□ 0.12
Smim4Q8C1Q6 AC140930.3-201ENSMUST00000222935 274 ntBASIC15.8■□□□□ 0.12
Smim4Q8C1Q6 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Smim4Q8C1Q6 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Smim4Q8C1Q6 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Smim4Q8C1Q6 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Smim4Q8C1Q6 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Smim4Q8C1Q6 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Smim4Q8C1Q6 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Smim4Q8C1Q6 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC15.79■□□□□ 0.12
Smim4Q8C1Q6 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Smim4Q8C1Q6 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Smim4Q8C1Q6 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Smim4Q8C1Q6 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Smim4Q8C1Q6 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Smim4Q8C1Q6 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC15.79■□□□□ 0.12
Smim4Q8C1Q6 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC15.79■□□□□ 0.12
Smim4Q8C1Q6 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Smim4Q8C1Q6 Gm13241-201ENSMUST00000094493 780 ntBASIC15.79■□□□□ 0.12
Smim4Q8C1Q6 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Smim4Q8C1Q6 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC15.79■□□□□ 0.12
Smim4Q8C1Q6 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Smim4Q8C1Q6 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Smim4Q8C1Q6 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Smim4Q8C1Q6 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Smim4Q8C1Q6 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Smim4Q8C1Q6 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Smim4Q8C1Q6 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Smim4Q8C1Q6 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Smim4Q8C1Q6 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Smim4Q8C1Q6 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Smim4Q8C1Q6 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Smim4Q8C1Q6 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Smim4Q8C1Q6 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Smim4Q8C1Q6 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Smim4Q8C1Q6 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Smim4Q8C1Q6 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Smim4Q8C1Q6 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Smim4Q8C1Q6 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Smim4Q8C1Q6 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Smim4Q8C1Q6 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC15.78■□□□□ 0.12
Smim4Q8C1Q6 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Smim4Q8C1Q6 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Smim4Q8C1Q6 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Smim4Q8C1Q6 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Smim4Q8C1Q6 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
Smim4Q8C1Q6 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Smim4Q8C1Q6 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
Smim4Q8C1Q6 BC021767-201ENSMUST00000126387 1716 ntBASIC15.77■□□□□ 0.12
Smim4Q8C1Q6 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Smim4Q8C1Q6 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Smim4Q8C1Q6 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC15.77■□□□□ 0.12
Smim4Q8C1Q6 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC15.77■□□□□ 0.12
Smim4Q8C1Q6 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Smim4Q8C1Q6 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Smim4Q8C1Q6 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Smim4Q8C1Q6 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Smim4Q8C1Q6 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.11
Smim4Q8C1Q6 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
Smim4Q8C1Q6 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.11
Smim4Q8C1Q6 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Smim4Q8C1Q6 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Smim4Q8C1Q6 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Smim4Q8C1Q6 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Smim4Q8C1Q6 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
Smim4Q8C1Q6 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Smim4Q8C1Q6 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Smim4Q8C1Q6 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Smim4Q8C1Q6 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Smim4Q8C1Q6 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Smim4Q8C1Q6 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Smim4Q8C1Q6 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Smim4Q8C1Q6 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Smim4Q8C1Q6 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
Smim4Q8C1Q6 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Smim4Q8C1Q6 AC137127.1-201ENSMUST00000213466 1078 ntBASIC15.76■□□□□ 0.11
Smim4Q8C1Q6 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Smim4Q8C1Q6 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Smim4Q8C1Q6 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC15.76■□□□□ 0.11
Smim4Q8C1Q6 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
Smim4Q8C1Q6 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Smim4Q8C1Q6 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Smim4Q8C1Q6 Gm5540-201ENSMUST00000131852 1848 ntBASIC15.75■□□□□ 0.11
Smim4Q8C1Q6 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Smim4Q8C1Q6 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 42.7 ms