Protein–RNA interactions for Protein: Q8C120

Sh3rf3, SH3 domain-containing RING finger protein 3, mousemouse

Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf3Q8C120 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Sh3rf3Q8C120 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Sh3rf3Q8C120 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Sh3rf3Q8C120 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC19.67■□□□□ 0.74
Sh3rf3Q8C120 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Sh3rf3Q8C120 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Sh3rf3Q8C120 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Sh3rf3Q8C120 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Sh3rf3Q8C120 Gm38342-201ENSMUST00000195710 2980 ntBASIC19.66■□□□□ 0.74
Sh3rf3Q8C120 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Sh3rf3Q8C120 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Sh3rf3Q8C120 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Sh3rf3Q8C120 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC19.66■□□□□ 0.74
Sh3rf3Q8C120 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Sh3rf3Q8C120 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Sh3rf3Q8C120 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Sh3rf3Q8C120 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Sh3rf3Q8C120 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Sh3rf3Q8C120 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Sh3rf3Q8C120 Rncr4-201ENSMUST00000194541 2234 ntBASIC19.66■□□□□ 0.74
Sh3rf3Q8C120 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
Sh3rf3Q8C120 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Sh3rf3Q8C120 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Sh3rf3Q8C120 AC126028.2-201ENSMUST00000228100 1833 ntBASIC19.65■□□□□ 0.74
Sh3rf3Q8C120 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Sh3rf3Q8C120 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC19.65■□□□□ 0.74
Sh3rf3Q8C120 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Sh3rf3Q8C120 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC19.65■□□□□ 0.74
Sh3rf3Q8C120 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Sh3rf3Q8C120 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Sh3rf3Q8C120 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Sh3rf3Q8C120 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Sh3rf3Q8C120 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
Sh3rf3Q8C120 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Sh3rf3Q8C120 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Sh3rf3Q8C120 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Sh3rf3Q8C120 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC19.64■□□□□ 0.73
Sh3rf3Q8C120 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Sh3rf3Q8C120 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC19.64■□□□□ 0.73
Sh3rf3Q8C120 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC19.64■□□□□ 0.73
Sh3rf3Q8C120 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Sh3rf3Q8C120 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Sh3rf3Q8C120 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Sh3rf3Q8C120 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Sh3rf3Q8C120 Gm5540-201ENSMUST00000131852 1848 ntBASIC19.64■□□□□ 0.73
Sh3rf3Q8C120 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Sh3rf3Q8C120 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC19.64■□□□□ 0.73
Sh3rf3Q8C120 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Sh3rf3Q8C120 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Sh3rf3Q8C120 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Sh3rf3Q8C120 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Sh3rf3Q8C120 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Sh3rf3Q8C120 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Sh3rf3Q8C120 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Sh3rf3Q8C120 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Sh3rf3Q8C120 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Sh3rf3Q8C120 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Sh3rf3Q8C120 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Sh3rf3Q8C120 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Sh3rf3Q8C120 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Sh3rf3Q8C120 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Sh3rf3Q8C120 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Sh3rf3Q8C120 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Sh3rf3Q8C120 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Sh3rf3Q8C120 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Sh3rf3Q8C120 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Sh3rf3Q8C120 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Sh3rf3Q8C120 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
Sh3rf3Q8C120 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Sh3rf3Q8C120 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Sh3rf3Q8C120 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Sh3rf3Q8C120 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Sh3rf3Q8C120 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Sh3rf3Q8C120 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Sh3rf3Q8C120 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Sh3rf3Q8C120 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Sh3rf3Q8C120 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Sh3rf3Q8C120 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Sh3rf3Q8C120 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Sh3rf3Q8C120 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC19.61■□□□□ 0.73
Sh3rf3Q8C120 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Sh3rf3Q8C120 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC19.61■□□□□ 0.73
Sh3rf3Q8C120 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Sh3rf3Q8C120 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
Sh3rf3Q8C120 Gm9988-201ENSMUST00000069786 435 ntBASIC19.61■□□□□ 0.73
Sh3rf3Q8C120 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC19.61■□□□□ 0.73
Sh3rf3Q8C120 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Sh3rf3Q8C120 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Sh3rf3Q8C120 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Sh3rf3Q8C120 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Sh3rf3Q8C120 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Sh3rf3Q8C120 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC19.6■□□□□ 0.73
Sh3rf3Q8C120 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Sh3rf3Q8C120 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Sh3rf3Q8C120 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Sh3rf3Q8C120 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Sh3rf3Q8C120 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Sh3rf3Q8C120 Reep4-203ENSMUST00000226563 1444 ntBASIC19.59■□□□□ 0.73
Sh3rf3Q8C120 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
Sh3rf3Q8C120 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms