Protein–RNA interactions for Protein: Q8BV79

Trank1, TPR and ankyrin repeat-containing protein 1, mousemouse

Predictions only

Length 2,999 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trank1Q8BV79 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trank1Q8BV79 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Trank1Q8BV79 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC16.5■□□□□ 0.23
Trank1Q8BV79 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Trank1Q8BV79 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC16.5■□□□□ 0.23
Trank1Q8BV79 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trank1Q8BV79 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC16.5■□□□□ 0.23
Trank1Q8BV79 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC16.5■□□□□ 0.23
Trank1Q8BV79 Gm7367-201ENSMUST00000057611 492 ntBASIC16.5■□□□□ 0.23
Trank1Q8BV79 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trank1Q8BV79 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC16.49■□□□□ 0.23
Trank1Q8BV79 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trank1Q8BV79 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Trank1Q8BV79 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Trank1Q8BV79 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trank1Q8BV79 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trank1Q8BV79 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Trank1Q8BV79 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC16.49■□□□□ 0.23
Trank1Q8BV79 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trank1Q8BV79 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trank1Q8BV79 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Trank1Q8BV79 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
Trank1Q8BV79 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Trank1Q8BV79 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trank1Q8BV79 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trank1Q8BV79 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Trank1Q8BV79 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trank1Q8BV79 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trank1Q8BV79 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trank1Q8BV79 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC16.48■□□□□ 0.23
Trank1Q8BV79 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trank1Q8BV79 Gm6659-201ENSMUST00000174752 547 ntBASIC16.48■□□□□ 0.23
Trank1Q8BV79 Alkbh1-212ENSMUST00000185301 408 ntBASIC16.48■□□□□ 0.23
Trank1Q8BV79 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trank1Q8BV79 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trank1Q8BV79 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trank1Q8BV79 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Trank1Q8BV79 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trank1Q8BV79 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trank1Q8BV79 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC16.47■□□□□ 0.23
Trank1Q8BV79 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC16.47■□□□□ 0.23
Trank1Q8BV79 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC16.47■□□□□ 0.23
Trank1Q8BV79 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trank1Q8BV79 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC16.47■□□□□ 0.23
Trank1Q8BV79 Gm8668-201ENSMUST00000120559 1447 ntBASIC16.47■□□□□ 0.23
Trank1Q8BV79 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Trank1Q8BV79 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Trank1Q8BV79 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trank1Q8BV79 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
Trank1Q8BV79 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trank1Q8BV79 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trank1Q8BV79 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC16.47■□□□□ 0.23
Trank1Q8BV79 AC175538.1-201ENSMUST00000225343 1269 ntBASIC16.47■□□□□ 0.23
Trank1Q8BV79 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trank1Q8BV79 Gm5417-201ENSMUST00000079706 384 ntBASIC16.47■□□□□ 0.23
Trank1Q8BV79 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trank1Q8BV79 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trank1Q8BV79 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Trank1Q8BV79 Gm44549-201ENSMUST00000208351 577 ntBASIC16.46■□□□□ 0.23
Trank1Q8BV79 AC140264.2-202ENSMUST00000218746 817 ntBASIC16.46■□□□□ 0.23
Trank1Q8BV79 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trank1Q8BV79 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trank1Q8BV79 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trank1Q8BV79 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC16.46■□□□□ 0.23
Trank1Q8BV79 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trank1Q8BV79 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trank1Q8BV79 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trank1Q8BV79 AC152827.1-201ENSMUST00000221143 2189 ntBASIC16.46■□□□□ 0.23
Trank1Q8BV79 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trank1Q8BV79 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trank1Q8BV79 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trank1Q8BV79 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.22
Trank1Q8BV79 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trank1Q8BV79 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trank1Q8BV79 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trank1Q8BV79 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Trank1Q8BV79 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Trank1Q8BV79 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trank1Q8BV79 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Trank1Q8BV79 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trank1Q8BV79 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trank1Q8BV79 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC16.45■□□□□ 0.22
Trank1Q8BV79 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Trank1Q8BV79 Gm15043-201ENSMUST00000118843 1543 ntBASIC16.45■□□□□ 0.22
Trank1Q8BV79 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trank1Q8BV79 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trank1Q8BV79 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Trank1Q8BV79 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trank1Q8BV79 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trank1Q8BV79 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Trank1Q8BV79 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Trank1Q8BV79 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Trank1Q8BV79 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trank1Q8BV79 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Trank1Q8BV79 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trank1Q8BV79 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trank1Q8BV79 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trank1Q8BV79 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trank1Q8BV79 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trank1Q8BV79 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms