Protein–RNA interactions for Protein: Q8BUV6

Lsm11, U7 snRNA-associated Sm-like protein LSm11, mousemouse

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm11Q8BUV6 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Lsm11Q8BUV6 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC16.05■□□□□ 0.16
Lsm11Q8BUV6 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Lsm11Q8BUV6 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
Lsm11Q8BUV6 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Lsm11Q8BUV6 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Lsm11Q8BUV6 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC16.04■□□□□ 0.16
Lsm11Q8BUV6 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Lsm11Q8BUV6 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Lsm11Q8BUV6 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Lsm11Q8BUV6 Gm45606-201ENSMUST00000209836 2795 ntBASIC16.04■□□□□ 0.16
Lsm11Q8BUV6 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Lsm11Q8BUV6 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Lsm11Q8BUV6 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Lsm11Q8BUV6 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Lsm11Q8BUV6 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Lsm11Q8BUV6 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Lsm11Q8BUV6 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Lsm11Q8BUV6 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Lsm11Q8BUV6 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Lsm11Q8BUV6 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Lsm11Q8BUV6 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Lsm11Q8BUV6 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
Lsm11Q8BUV6 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Lsm11Q8BUV6 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC16.03■□□□□ 0.16
Lsm11Q8BUV6 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Lsm11Q8BUV6 Gm43759-201ENSMUST00000196925 1261 ntBASIC16.03■□□□□ 0.16
Lsm11Q8BUV6 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC16.03■□□□□ 0.16
Lsm11Q8BUV6 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Lsm11Q8BUV6 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Lsm11Q8BUV6 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Lsm11Q8BUV6 Gm44832-201ENSMUST00000208849 2303 ntBASIC16.03■□□□□ 0.16
Lsm11Q8BUV6 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Lsm11Q8BUV6 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Lsm11Q8BUV6 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Lsm11Q8BUV6 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Lsm11Q8BUV6 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Lsm11Q8BUV6 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Lsm11Q8BUV6 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Lsm11Q8BUV6 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Lsm11Q8BUV6 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Lsm11Q8BUV6 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
Lsm11Q8BUV6 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Lsm11Q8BUV6 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
Lsm11Q8BUV6 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
Lsm11Q8BUV6 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Lsm11Q8BUV6 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Lsm11Q8BUV6 Gm15546-201ENSMUST00000122095 826 ntBASIC16.02■□□□□ 0.16
Lsm11Q8BUV6 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC16.02■□□□□ 0.16
Lsm11Q8BUV6 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC16.02■□□□□ 0.16
Lsm11Q8BUV6 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
Lsm11Q8BUV6 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Lsm11Q8BUV6 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Lsm11Q8BUV6 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Lsm11Q8BUV6 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Lsm11Q8BUV6 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Lsm11Q8BUV6 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Lsm11Q8BUV6 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
Lsm11Q8BUV6 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Lsm11Q8BUV6 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Lsm11Q8BUV6 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Lsm11Q8BUV6 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Lsm11Q8BUV6 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Lsm11Q8BUV6 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC16.01■□□□□ 0.15
Lsm11Q8BUV6 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC16.01■□□□□ 0.15
Lsm11Q8BUV6 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC16.01■□□□□ 0.15
Lsm11Q8BUV6 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Lsm11Q8BUV6 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Lsm11Q8BUV6 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC16.01■□□□□ 0.15
Lsm11Q8BUV6 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC16.01■□□□□ 0.15
Lsm11Q8BUV6 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC16.01■□□□□ 0.15
Lsm11Q8BUV6 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Lsm11Q8BUV6 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Lsm11Q8BUV6 Gm45141-201ENSMUST00000206502 1888 ntBASIC16.01■□□□□ 0.15
Lsm11Q8BUV6 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Lsm11Q8BUV6 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Lsm11Q8BUV6 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Lsm11Q8BUV6 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Lsm11Q8BUV6 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
Lsm11Q8BUV6 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Lsm11Q8BUV6 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Lsm11Q8BUV6 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC16■□□□□ 0.15
Lsm11Q8BUV6 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC16■□□□□ 0.15
Lsm11Q8BUV6 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Lsm11Q8BUV6 Gm9959-201ENSMUST00000068277 390 ntBASIC16■□□□□ 0.15
Lsm11Q8BUV6 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
Lsm11Q8BUV6 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Lsm11Q8BUV6 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC15.99■□□□□ 0.15
Lsm11Q8BUV6 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Lsm11Q8BUV6 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
Lsm11Q8BUV6 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Lsm11Q8BUV6 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Lsm11Q8BUV6 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Lsm11Q8BUV6 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
Lsm11Q8BUV6 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC15.99■□□□□ 0.15
Lsm11Q8BUV6 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Lsm11Q8BUV6 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Lsm11Q8BUV6 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Lsm11Q8BUV6 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Lsm11Q8BUV6 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms