Protein–RNA interactions for Protein: Q8BUP8

Fam43a, Protein FAM43A, mousemouse

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam43aQ8BUP8 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Fam43aQ8BUP8 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Fam43aQ8BUP8 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
Fam43aQ8BUP8 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Fam43aQ8BUP8 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Fam43aQ8BUP8 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Fam43aQ8BUP8 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Fam43aQ8BUP8 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC20.92■□□□□ 0.94
Fam43aQ8BUP8 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC20.92■□□□□ 0.94
Fam43aQ8BUP8 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC20.92■□□□□ 0.94
Fam43aQ8BUP8 Gm27454-201ENSMUST00000185090 204 ntBASIC20.92■□□□□ 0.94
Fam43aQ8BUP8 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
Fam43aQ8BUP8 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Fam43aQ8BUP8 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Fam43aQ8BUP8 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Fam43aQ8BUP8 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Fam43aQ8BUP8 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC20.91■□□□□ 0.94
Fam43aQ8BUP8 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Fam43aQ8BUP8 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Fam43aQ8BUP8 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Fam43aQ8BUP8 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Fam43aQ8BUP8 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC20.91■□□□□ 0.94
Fam43aQ8BUP8 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Fam43aQ8BUP8 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Fam43aQ8BUP8 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Fam43aQ8BUP8 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Fam43aQ8BUP8 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Fam43aQ8BUP8 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
Fam43aQ8BUP8 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Fam43aQ8BUP8 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Fam43aQ8BUP8 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Fam43aQ8BUP8 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Fam43aQ8BUP8 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Fam43aQ8BUP8 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Fam43aQ8BUP8 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Fam43aQ8BUP8 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Fam43aQ8BUP8 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC20.9■□□□□ 0.94
Fam43aQ8BUP8 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Fam43aQ8BUP8 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Fam43aQ8BUP8 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC20.9■□□□□ 0.94
Fam43aQ8BUP8 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Fam43aQ8BUP8 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.94
Fam43aQ8BUP8 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Fam43aQ8BUP8 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Fam43aQ8BUP8 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Fam43aQ8BUP8 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
Fam43aQ8BUP8 Gm27045-201ENSMUST00000182145 1402 ntBASIC20.89■□□□□ 0.94
Fam43aQ8BUP8 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Fam43aQ8BUP8 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Fam43aQ8BUP8 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
Fam43aQ8BUP8 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
Fam43aQ8BUP8 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC20.89■□□□□ 0.93
Fam43aQ8BUP8 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Fam43aQ8BUP8 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Fam43aQ8BUP8 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Fam43aQ8BUP8 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Fam43aQ8BUP8 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
Fam43aQ8BUP8 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Fam43aQ8BUP8 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Fam43aQ8BUP8 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Fam43aQ8BUP8 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Fam43aQ8BUP8 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Fam43aQ8BUP8 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Fam43aQ8BUP8 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC20.88■□□□□ 0.93
Fam43aQ8BUP8 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
Fam43aQ8BUP8 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Fam43aQ8BUP8 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Fam43aQ8BUP8 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC20.88■□□□□ 0.93
Fam43aQ8BUP8 Appbp2os-202ENSMUST00000206972 447 ntBASIC20.88■□□□□ 0.93
Fam43aQ8BUP8 Gm45417-201ENSMUST00000209533 758 ntBASIC20.88■□□□□ 0.93
Fam43aQ8BUP8 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC20.88■□□□□ 0.93
Fam43aQ8BUP8 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Fam43aQ8BUP8 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC20.88■□□□□ 0.93
Fam43aQ8BUP8 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Fam43aQ8BUP8 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Fam43aQ8BUP8 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
Fam43aQ8BUP8 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Fam43aQ8BUP8 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Fam43aQ8BUP8 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
Fam43aQ8BUP8 Gm45412-201ENSMUST00000210217 2275 ntBASIC20.88■□□□□ 0.93
Fam43aQ8BUP8 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
Fam43aQ8BUP8 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Fam43aQ8BUP8 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
Fam43aQ8BUP8 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Fam43aQ8BUP8 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Fam43aQ8BUP8 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Fam43aQ8BUP8 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Fam43aQ8BUP8 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Fam43aQ8BUP8 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Fam43aQ8BUP8 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Fam43aQ8BUP8 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Fam43aQ8BUP8 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Fam43aQ8BUP8 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
Fam43aQ8BUP8 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Fam43aQ8BUP8 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Fam43aQ8BUP8 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC20.86■□□□□ 0.93
Fam43aQ8BUP8 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Fam43aQ8BUP8 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Fam43aQ8BUP8 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Fam43aQ8BUP8 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms