Protein–RNA interactions for Protein: Q8BRE0

Rd3, Protein RD3, mousemouse

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rd3Q8BRE0 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Rd3Q8BRE0 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Rd3Q8BRE0 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Rd3Q8BRE0 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Rd3Q8BRE0 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Rd3Q8BRE0 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Rd3Q8BRE0 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC20.06■□□□□ 0.8
Rd3Q8BRE0 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC20.06■□□□□ 0.8
Rd3Q8BRE0 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC20.06■□□□□ 0.8
Rd3Q8BRE0 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC20.06■□□□□ 0.8
Rd3Q8BRE0 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC20.06■□□□□ 0.8
Rd3Q8BRE0 Gm10812-201ENSMUST00000099864 546 ntBASIC20.06■□□□□ 0.8
Rd3Q8BRE0 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Rd3Q8BRE0 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rd3Q8BRE0 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rd3Q8BRE0 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rd3Q8BRE0 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Rd3Q8BRE0 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rd3Q8BRE0 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC20.05■□□□□ 0.8
Rd3Q8BRE0 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC20.05■□□□□ 0.8
Rd3Q8BRE0 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC20.05■□□□□ 0.8
Rd3Q8BRE0 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rd3Q8BRE0 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Rd3Q8BRE0 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rd3Q8BRE0 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
Rd3Q8BRE0 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rd3Q8BRE0 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rd3Q8BRE0 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
Rd3Q8BRE0 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
Rd3Q8BRE0 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Rd3Q8BRE0 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Rd3Q8BRE0 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC20.04■□□□□ 0.8
Rd3Q8BRE0 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Rd3Q8BRE0 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC20.04■□□□□ 0.8
Rd3Q8BRE0 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Rd3Q8BRE0 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Rd3Q8BRE0 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Rd3Q8BRE0 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC20.04■□□□□ 0.8
Rd3Q8BRE0 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC20.04■□□□□ 0.8
Rd3Q8BRE0 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Rd3Q8BRE0 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Rd3Q8BRE0 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Rd3Q8BRE0 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
Rd3Q8BRE0 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
Rd3Q8BRE0 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Rd3Q8BRE0 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Rd3Q8BRE0 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Rd3Q8BRE0 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC20.03■□□□□ 0.8
Rd3Q8BRE0 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC20.03■□□□□ 0.8
Rd3Q8BRE0 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
Rd3Q8BRE0 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Rd3Q8BRE0 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Rd3Q8BRE0 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Rd3Q8BRE0 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Rd3Q8BRE0 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
Rd3Q8BRE0 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC20.02■□□□□ 0.8
Rd3Q8BRE0 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Rd3Q8BRE0 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Rd3Q8BRE0 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC20.02■□□□□ 0.8
Rd3Q8BRE0 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC20.02■□□□□ 0.79
Rd3Q8BRE0 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Rd3Q8BRE0 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Rd3Q8BRE0 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Rd3Q8BRE0 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC20.01■□□□□ 0.79
Rd3Q8BRE0 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Rd3Q8BRE0 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC20.01■□□□□ 0.79
Rd3Q8BRE0 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Rd3Q8BRE0 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Rd3Q8BRE0 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Rd3Q8BRE0 Gm6277-202ENSMUST00000224036 2779 ntBASIC20.01■□□□□ 0.79
Rd3Q8BRE0 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Rd3Q8BRE0 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Rd3Q8BRE0 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Rd3Q8BRE0 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Rd3Q8BRE0 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC20■□□□□ 0.79
Rd3Q8BRE0 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Rd3Q8BRE0 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Rd3Q8BRE0 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC20■□□□□ 0.79
Rd3Q8BRE0 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
Rd3Q8BRE0 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Rd3Q8BRE0 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC20■□□□□ 0.79
Rd3Q8BRE0 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Rd3Q8BRE0 Gm12896-201ENSMUST00000118430 226 ntBASIC20■□□□□ 0.79
Rd3Q8BRE0 Gm27275-201ENSMUST00000184318 272 ntBASIC20■□□□□ 0.79
Rd3Q8BRE0 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Rd3Q8BRE0 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Rd3Q8BRE0 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC20■□□□□ 0.79
Rd3Q8BRE0 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC20■□□□□ 0.79
Rd3Q8BRE0 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
Rd3Q8BRE0 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC20■□□□□ 0.79
Rd3Q8BRE0 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
Rd3Q8BRE0 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Rd3Q8BRE0 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Rd3Q8BRE0 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Rd3Q8BRE0 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Rd3Q8BRE0 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
Rd3Q8BRE0 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Rd3Q8BRE0 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Rd3Q8BRE0 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC19.99■□□□□ 0.79
Rd3Q8BRE0 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms