Protein–RNA interactions for Protein: Q8BP27

Sfr1, Swi5-dependent recombination DNA repair protein 1 homolog, mousemouse

Predictions only

Length 319 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sfr1Q8BP27 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Sfr1Q8BP27 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Sfr1Q8BP27 Gm13146-201ENSMUST00000118508 780 ntBASIC19.13■□□□□ 0.65
Sfr1Q8BP27 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Sfr1Q8BP27 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Sfr1Q8BP27 Gm42569-201ENSMUST00000200539 472 ntBASIC19.13■□□□□ 0.65
Sfr1Q8BP27 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC19.13■□□□□ 0.65
Sfr1Q8BP27 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Sfr1Q8BP27 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Sfr1Q8BP27 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC19.13■□□□□ 0.65
Sfr1Q8BP27 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Sfr1Q8BP27 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Sfr1Q8BP27 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Sfr1Q8BP27 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Sfr1Q8BP27 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Sfr1Q8BP27 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Sfr1Q8BP27 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Sfr1Q8BP27 Gm38342-201ENSMUST00000195710 2980 ntBASIC19.13■□□□□ 0.65
Sfr1Q8BP27 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Sfr1Q8BP27 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Sfr1Q8BP27 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC19.12■□□□□ 0.65
Sfr1Q8BP27 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Sfr1Q8BP27 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC19.12■□□□□ 0.65
Sfr1Q8BP27 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC19.12■□□□□ 0.65
Sfr1Q8BP27 Gm10849-201ENSMUST00000100397 618 ntBASIC19.12■□□□□ 0.65
Sfr1Q8BP27 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC19.12■□□□□ 0.65
Sfr1Q8BP27 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
Sfr1Q8BP27 CT010467.1-202ENSMUST00000205406 714 ntBASIC19.12■□□□□ 0.65
Sfr1Q8BP27 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC19.12■□□□□ 0.65
Sfr1Q8BP27 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Sfr1Q8BP27 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Sfr1Q8BP27 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Sfr1Q8BP27 Gm26571-201ENSMUST00000181399 666 ntBASIC19.11■□□□□ 0.65
Sfr1Q8BP27 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Sfr1Q8BP27 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
Sfr1Q8BP27 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Sfr1Q8BP27 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Sfr1Q8BP27 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Sfr1Q8BP27 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Sfr1Q8BP27 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Sfr1Q8BP27 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Sfr1Q8BP27 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
Sfr1Q8BP27 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC19.1■□□□□ 0.65
Sfr1Q8BP27 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC19.1■□□□□ 0.65
Sfr1Q8BP27 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Sfr1Q8BP27 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Sfr1Q8BP27 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Sfr1Q8BP27 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Sfr1Q8BP27 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Sfr1Q8BP27 Gm27032-201ENSMUST00000183124 1116 ntBASIC19.09■□□□□ 0.65
Sfr1Q8BP27 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Sfr1Q8BP27 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Sfr1Q8BP27 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Sfr1Q8BP27 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.65
Sfr1Q8BP27 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC19.08■□□□□ 0.65
Sfr1Q8BP27 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
Sfr1Q8BP27 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Sfr1Q8BP27 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Sfr1Q8BP27 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Sfr1Q8BP27 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC19.08■□□□□ 0.65
Sfr1Q8BP27 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
Sfr1Q8BP27 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
Sfr1Q8BP27 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC19.08■□□□□ 0.64
Sfr1Q8BP27 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Sfr1Q8BP27 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Sfr1Q8BP27 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.64
Sfr1Q8BP27 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
Sfr1Q8BP27 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Sfr1Q8BP27 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Sfr1Q8BP27 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Sfr1Q8BP27 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Sfr1Q8BP27 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Sfr1Q8BP27 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Sfr1Q8BP27 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC19.07■□□□□ 0.64
Sfr1Q8BP27 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Sfr1Q8BP27 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
Sfr1Q8BP27 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
Sfr1Q8BP27 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC19.07■□□□□ 0.64
Sfr1Q8BP27 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Sfr1Q8BP27 AC154231.1-201ENSMUST00000220564 2175 ntBASIC19.07■□□□□ 0.64
Sfr1Q8BP27 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Sfr1Q8BP27 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Sfr1Q8BP27 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
Sfr1Q8BP27 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Sfr1Q8BP27 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Sfr1Q8BP27 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Sfr1Q8BP27 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Sfr1Q8BP27 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Sfr1Q8BP27 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Sfr1Q8BP27 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Sfr1Q8BP27 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Sfr1Q8BP27 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
Sfr1Q8BP27 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC19.06■□□□□ 0.64
Sfr1Q8BP27 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Sfr1Q8BP27 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC19.06■□□□□ 0.64
Sfr1Q8BP27 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC19.06■□□□□ 0.64
Sfr1Q8BP27 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Sfr1Q8BP27 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
Sfr1Q8BP27 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Sfr1Q8BP27 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms