Protein–RNA interactions for Protein: Q8BIZ0

Pcdh20, Protocadherin-20, mousemouse

Predictions only

Length 952 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh20Q8BIZ0 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Pcdh20Q8BIZ0 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdh20Q8BIZ0 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC18.38■□□□□ 0.53
Pcdh20Q8BIZ0 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Pcdh20Q8BIZ0 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdh20Q8BIZ0 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdh20Q8BIZ0 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC18.38■□□□□ 0.53
Pcdh20Q8BIZ0 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC18.38■□□□□ 0.53
Pcdh20Q8BIZ0 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdh20Q8BIZ0 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdh20Q8BIZ0 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Pcdh20Q8BIZ0 AC165080.2-201ENSMUST00000217491 1530 ntBASIC18.38■□□□□ 0.53
Pcdh20Q8BIZ0 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdh20Q8BIZ0 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdh20Q8BIZ0 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdh20Q8BIZ0 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdh20Q8BIZ0 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdh20Q8BIZ0 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdh20Q8BIZ0 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdh20Q8BIZ0 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdh20Q8BIZ0 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Pcdh20Q8BIZ0 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC18.37■□□□□ 0.53
Pcdh20Q8BIZ0 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC18.37■□□□□ 0.53
Pcdh20Q8BIZ0 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdh20Q8BIZ0 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC18.37■□□□□ 0.53
Pcdh20Q8BIZ0 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdh20Q8BIZ0 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Pcdh20Q8BIZ0 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdh20Q8BIZ0 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdh20Q8BIZ0 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdh20Q8BIZ0 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdh20Q8BIZ0 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdh20Q8BIZ0 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdh20Q8BIZ0 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdh20Q8BIZ0 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC18.36■□□□□ 0.53
Pcdh20Q8BIZ0 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdh20Q8BIZ0 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdh20Q8BIZ0 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdh20Q8BIZ0 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdh20Q8BIZ0 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdh20Q8BIZ0 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdh20Q8BIZ0 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdh20Q8BIZ0 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdh20Q8BIZ0 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Pcdh20Q8BIZ0 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdh20Q8BIZ0 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC18.34■□□□□ 0.53
Pcdh20Q8BIZ0 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdh20Q8BIZ0 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdh20Q8BIZ0 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
Pcdh20Q8BIZ0 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdh20Q8BIZ0 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC18.34■□□□□ 0.53
Pcdh20Q8BIZ0 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdh20Q8BIZ0 Gm11421-201ENSMUST00000122124 294 ntBASIC18.34■□□□□ 0.53
Pcdh20Q8BIZ0 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC18.34■□□□□ 0.53
Pcdh20Q8BIZ0 Gm18284-201ENSMUST00000172604 624 ntBASIC18.34■□□□□ 0.53
Pcdh20Q8BIZ0 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdh20Q8BIZ0 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdh20Q8BIZ0 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdh20Q8BIZ0 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdh20Q8BIZ0 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC18.34■□□□□ 0.53
Pcdh20Q8BIZ0 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdh20Q8BIZ0 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Pcdh20Q8BIZ0 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Pcdh20Q8BIZ0 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC18.33■□□□□ 0.53
Pcdh20Q8BIZ0 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Pcdh20Q8BIZ0 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Pcdh20Q8BIZ0 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Pcdh20Q8BIZ0 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Pcdh20Q8BIZ0 Gm40848-201ENSMUST00000221998 324 ntBASIC18.33■□□□□ 0.52
Pcdh20Q8BIZ0 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Pcdh20Q8BIZ0 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Pcdh20Q8BIZ0 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC18.33■□□□□ 0.52
Pcdh20Q8BIZ0 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC18.33■□□□□ 0.52
Pcdh20Q8BIZ0 Rarb-207ENSMUST00000225921 2756 ntBASIC18.33■□□□□ 0.52
Pcdh20Q8BIZ0 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdh20Q8BIZ0 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdh20Q8BIZ0 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdh20Q8BIZ0 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdh20Q8BIZ0 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdh20Q8BIZ0 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdh20Q8BIZ0 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC18.32■□□□□ 0.52
Pcdh20Q8BIZ0 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC18.32■□□□□ 0.52
Pcdh20Q8BIZ0 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdh20Q8BIZ0 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdh20Q8BIZ0 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Pcdh20Q8BIZ0 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdh20Q8BIZ0 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdh20Q8BIZ0 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdh20Q8BIZ0 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdh20Q8BIZ0 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdh20Q8BIZ0 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdh20Q8BIZ0 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdh20Q8BIZ0 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdh20Q8BIZ0 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdh20Q8BIZ0 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdh20Q8BIZ0 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdh20Q8BIZ0 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdh20Q8BIZ0 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdh20Q8BIZ0 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdh20Q8BIZ0 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms