Protein–RNA interactions for Protein: Q8BI17

Sh2d7, SH2 domain-containing protein 7, mousemouse

Predictions only

Length 458 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2d7Q8BI17 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Sh2d7Q8BI17 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Sh2d7Q8BI17 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Sh2d7Q8BI17 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC16.75■□□□□ 0.27
Sh2d7Q8BI17 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC16.75■□□□□ 0.27
Sh2d7Q8BI17 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Sh2d7Q8BI17 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Sh2d7Q8BI17 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Sh2d7Q8BI17 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC16.75■□□□□ 0.27
Sh2d7Q8BI17 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Sh2d7Q8BI17 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Sh2d7Q8BI17 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Sh2d7Q8BI17 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC16.74■□□□□ 0.27
Sh2d7Q8BI17 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC16.74■□□□□ 0.27
Sh2d7Q8BI17 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Sh2d7Q8BI17 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Sh2d7Q8BI17 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Sh2d7Q8BI17 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Sh2d7Q8BI17 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Sh2d7Q8BI17 AV356131-201ENSMUST00000206201 750 ntBASIC16.74■□□□□ 0.27
Sh2d7Q8BI17 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Sh2d7Q8BI17 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Sh2d7Q8BI17 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC16.74■□□□□ 0.27
Sh2d7Q8BI17 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Sh2d7Q8BI17 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC16.74■□□□□ 0.27
Sh2d7Q8BI17 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Sh2d7Q8BI17 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Sh2d7Q8BI17 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC16.74■□□□□ 0.27
Sh2d7Q8BI17 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Sh2d7Q8BI17 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Sh2d7Q8BI17 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Sh2d7Q8BI17 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Sh2d7Q8BI17 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Sh2d7Q8BI17 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Sh2d7Q8BI17 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Sh2d7Q8BI17 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Sh2d7Q8BI17 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Sh2d7Q8BI17 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC16.73■□□□□ 0.27
Sh2d7Q8BI17 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Sh2d7Q8BI17 Slc35b2-207ENSMUST00000226086 850 ntBASIC16.73■□□□□ 0.27
Sh2d7Q8BI17 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC16.73■□□□□ 0.27
Sh2d7Q8BI17 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC16.73■□□□□ 0.27
Sh2d7Q8BI17 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Sh2d7Q8BI17 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Sh2d7Q8BI17 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Sh2d7Q8BI17 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Sh2d7Q8BI17 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Sh2d7Q8BI17 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC16.72■□□□□ 0.27
Sh2d7Q8BI17 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC16.72■□□□□ 0.27
Sh2d7Q8BI17 Gm7860-201ENSMUST00000121190 879 ntBASIC16.72■□□□□ 0.27
Sh2d7Q8BI17 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Sh2d7Q8BI17 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC16.72■□□□□ 0.27
Sh2d7Q8BI17 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Sh2d7Q8BI17 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Sh2d7Q8BI17 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC16.71■□□□□ 0.27
Sh2d7Q8BI17 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Sh2d7Q8BI17 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Sh2d7Q8BI17 Gm10849-201ENSMUST00000100397 618 ntBASIC16.71■□□□□ 0.27
Sh2d7Q8BI17 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC16.71■□□□□ 0.27
Sh2d7Q8BI17 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC16.71■□□□□ 0.27
Sh2d7Q8BI17 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Sh2d7Q8BI17 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Sh2d7Q8BI17 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Sh2d7Q8BI17 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
Sh2d7Q8BI17 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Sh2d7Q8BI17 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Sh2d7Q8BI17 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Sh2d7Q8BI17 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Sh2d7Q8BI17 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Sh2d7Q8BI17 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Sh2d7Q8BI17 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Sh2d7Q8BI17 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Sh2d7Q8BI17 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Sh2d7Q8BI17 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Sh2d7Q8BI17 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Sh2d7Q8BI17 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC16.7■□□□□ 0.26
Sh2d7Q8BI17 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Sh2d7Q8BI17 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Sh2d7Q8BI17 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Sh2d7Q8BI17 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Sh2d7Q8BI17 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Sh2d7Q8BI17 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Sh2d7Q8BI17 Gm45640-201ENSMUST00000210665 1896 ntBASIC16.69■□□□□ 0.26
Sh2d7Q8BI17 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Sh2d7Q8BI17 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Sh2d7Q8BI17 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Sh2d7Q8BI17 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Sh2d7Q8BI17 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
Sh2d7Q8BI17 AC164629.5-201ENSMUST00000220387 632 ntBASIC16.69■□□□□ 0.26
Sh2d7Q8BI17 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC16.69■□□□□ 0.26
Sh2d7Q8BI17 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Sh2d7Q8BI17 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC16.69■□□□□ 0.26
Sh2d7Q8BI17 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC16.69■□□□□ 0.26
Sh2d7Q8BI17 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Sh2d7Q8BI17 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Sh2d7Q8BI17 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Sh2d7Q8BI17 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Sh2d7Q8BI17 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Sh2d7Q8BI17 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Sh2d7Q8BI17 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms