Protein–RNA interactions for Protein: Q8BGE6

Atg4b, Cysteine protease ATG4B, mousemouse

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4bQ8BGE6 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Atg4bQ8BGE6 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Atg4bQ8BGE6 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC17.8■□□□□ 0.44
Atg4bQ8BGE6 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Atg4bQ8BGE6 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Atg4bQ8BGE6 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC17.8■□□□□ 0.44
Atg4bQ8BGE6 Gm15039-201ENSMUST00000118914 875 ntBASIC17.8■□□□□ 0.44
Atg4bQ8BGE6 AC099934.2-201ENSMUST00000196389 70 ntBASIC17.8■□□□□ 0.44
Atg4bQ8BGE6 AC156953.1-201ENSMUST00000196953 70 ntBASIC17.8■□□□□ 0.44
Atg4bQ8BGE6 AC157822.2-201ENSMUST00000200291 70 ntBASIC17.8■□□□□ 0.44
Atg4bQ8BGE6 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Atg4bQ8BGE6 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Atg4bQ8BGE6 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Atg4bQ8BGE6 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Atg4bQ8BGE6 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Atg4bQ8BGE6 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Atg4bQ8BGE6 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Atg4bQ8BGE6 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Atg4bQ8BGE6 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Atg4bQ8BGE6 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC17.79■□□□□ 0.44
Atg4bQ8BGE6 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC17.79■□□□□ 0.44
Atg4bQ8BGE6 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Atg4bQ8BGE6 CT010467.1-202ENSMUST00000205406 714 ntBASIC17.79■□□□□ 0.44
Atg4bQ8BGE6 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Atg4bQ8BGE6 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Atg4bQ8BGE6 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Atg4bQ8BGE6 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Atg4bQ8BGE6 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Atg4bQ8BGE6 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Atg4bQ8BGE6 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Atg4bQ8BGE6 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Atg4bQ8BGE6 Gm13234-201ENSMUST00000120010 747 ntBASIC17.78■□□□□ 0.44
Atg4bQ8BGE6 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC17.78■□□□□ 0.44
Atg4bQ8BGE6 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Atg4bQ8BGE6 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC17.78■□□□□ 0.44
Atg4bQ8BGE6 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Atg4bQ8BGE6 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Atg4bQ8BGE6 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Atg4bQ8BGE6 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Atg4bQ8BGE6 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Atg4bQ8BGE6 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC17.77■□□□□ 0.44
Atg4bQ8BGE6 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Atg4bQ8BGE6 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
Atg4bQ8BGE6 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Atg4bQ8BGE6 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Atg4bQ8BGE6 Gm27032-201ENSMUST00000183124 1116 ntBASIC17.77■□□□□ 0.44
Atg4bQ8BGE6 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC17.77■□□□□ 0.44
Atg4bQ8BGE6 Gm42778-201ENSMUST00000199644 553 ntBASIC17.77■□□□□ 0.44
Atg4bQ8BGE6 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC17.77■□□□□ 0.44
Atg4bQ8BGE6 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
Atg4bQ8BGE6 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Atg4bQ8BGE6 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Atg4bQ8BGE6 Gm5874-201ENSMUST00000096101 508 ntBASIC17.77■□□□□ 0.44
Atg4bQ8BGE6 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Atg4bQ8BGE6 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Atg4bQ8BGE6 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Atg4bQ8BGE6 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Atg4bQ8BGE6 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Atg4bQ8BGE6 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Atg4bQ8BGE6 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Atg4bQ8BGE6 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Atg4bQ8BGE6 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Atg4bQ8BGE6 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Atg4bQ8BGE6 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Atg4bQ8BGE6 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Atg4bQ8BGE6 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Atg4bQ8BGE6 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Atg4bQ8BGE6 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Atg4bQ8BGE6 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Atg4bQ8BGE6 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC17.76■□□□□ 0.43
Atg4bQ8BGE6 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
Atg4bQ8BGE6 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Atg4bQ8BGE6 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Atg4bQ8BGE6 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Atg4bQ8BGE6 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Atg4bQ8BGE6 Gm13146-201ENSMUST00000118508 780 ntBASIC17.75■□□□□ 0.43
Atg4bQ8BGE6 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC17.75■□□□□ 0.43
Atg4bQ8BGE6 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
Atg4bQ8BGE6 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Atg4bQ8BGE6 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Atg4bQ8BGE6 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Atg4bQ8BGE6 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Atg4bQ8BGE6 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Atg4bQ8BGE6 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Atg4bQ8BGE6 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Atg4bQ8BGE6 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Atg4bQ8BGE6 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Atg4bQ8BGE6 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Atg4bQ8BGE6 Gm18284-201ENSMUST00000172604 624 ntBASIC17.74■□□□□ 0.43
Atg4bQ8BGE6 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Atg4bQ8BGE6 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Atg4bQ8BGE6 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Atg4bQ8BGE6 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Atg4bQ8BGE6 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Atg4bQ8BGE6 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Atg4bQ8BGE6 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Atg4bQ8BGE6 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Atg4bQ8BGE6 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Atg4bQ8BGE6 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Atg4bQ8BGE6 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms