Protein–RNA interactions for Protein: Q8BGB5

Limd2, LIM domain-containing protein 2, mousemouse

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Limd2Q8BGB5 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Limd2Q8BGB5 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
Limd2Q8BGB5 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Limd2Q8BGB5 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Limd2Q8BGB5 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC10.36□□□□□ -0.75
Limd2Q8BGB5 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Limd2Q8BGB5 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Limd2Q8BGB5 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Limd2Q8BGB5 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC10.36□□□□□ -0.75
Limd2Q8BGB5 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC10.36□□□□□ -0.75
Limd2Q8BGB5 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC10.36□□□□□ -0.75
Limd2Q8BGB5 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Limd2Q8BGB5 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC10.36□□□□□ -0.75
Limd2Q8BGB5 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Limd2Q8BGB5 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC10.36□□□□□ -0.75
Limd2Q8BGB5 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Limd2Q8BGB5 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
Limd2Q8BGB5 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Limd2Q8BGB5 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Limd2Q8BGB5 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
Limd2Q8BGB5 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Limd2Q8BGB5 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
Limd2Q8BGB5 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
Limd2Q8BGB5 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Limd2Q8BGB5 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Limd2Q8BGB5 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Limd2Q8BGB5 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Limd2Q8BGB5 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC10.35□□□□□ -0.75
Limd2Q8BGB5 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Limd2Q8BGB5 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Limd2Q8BGB5 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Limd2Q8BGB5 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Limd2Q8BGB5 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Limd2Q8BGB5 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC10.35□□□□□ -0.75
Limd2Q8BGB5 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC10.35□□□□□ -0.75
Limd2Q8BGB5 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Limd2Q8BGB5 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC10.35□□□□□ -0.75
Limd2Q8BGB5 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Limd2Q8BGB5 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC10.35□□□□□ -0.75
Limd2Q8BGB5 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Limd2Q8BGB5 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Limd2Q8BGB5 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Limd2Q8BGB5 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Limd2Q8BGB5 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Limd2Q8BGB5 Gm15743-202ENSMUST00000182690 1901 ntBASIC10.35□□□□□ -0.75
Limd2Q8BGB5 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Limd2Q8BGB5 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Limd2Q8BGB5 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
Limd2Q8BGB5 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Limd2Q8BGB5 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Limd2Q8BGB5 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Limd2Q8BGB5 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Limd2Q8BGB5 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Limd2Q8BGB5 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Limd2Q8BGB5 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
Limd2Q8BGB5 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Limd2Q8BGB5 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC10.34□□□□□ -0.75
Limd2Q8BGB5 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Limd2Q8BGB5 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Limd2Q8BGB5 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Limd2Q8BGB5 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Limd2Q8BGB5 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Limd2Q8BGB5 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Limd2Q8BGB5 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Limd2Q8BGB5 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Limd2Q8BGB5 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Limd2Q8BGB5 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Limd2Q8BGB5 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Limd2Q8BGB5 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Limd2Q8BGB5 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Limd2Q8BGB5 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC10.33□□□□□ -0.76
Limd2Q8BGB5 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC10.33□□□□□ -0.76
Limd2Q8BGB5 AC117245.4-201ENSMUST00000217388 1646 ntBASIC10.33□□□□□ -0.76
Limd2Q8BGB5 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Limd2Q8BGB5 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Limd2Q8BGB5 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Limd2Q8BGB5 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC10.33□□□□□ -0.76
Limd2Q8BGB5 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Limd2Q8BGB5 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Limd2Q8BGB5 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Limd2Q8BGB5 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC10.33□□□□□ -0.76
Limd2Q8BGB5 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Limd2Q8BGB5 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Limd2Q8BGB5 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Limd2Q8BGB5 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Limd2Q8BGB5 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC10.33□□□□□ -0.76
Limd2Q8BGB5 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Limd2Q8BGB5 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Limd2Q8BGB5 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Limd2Q8BGB5 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC10.32□□□□□ -0.76
Limd2Q8BGB5 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Limd2Q8BGB5 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Limd2Q8BGB5 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Limd2Q8BGB5 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Limd2Q8BGB5 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Limd2Q8BGB5 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Limd2Q8BGB5 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC10.32□□□□□ -0.76
Limd2Q8BGB5 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Limd2Q8BGB5 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC10.32□□□□□ -0.76
Limd2Q8BGB5 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 14.7 ms