Protein–RNA interactions for Protein: Q6Q899

Ddx58, Probable ATP-dependent RNA helicase DDX58, mousemouse

Predictions only

Length 926 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx58Q6Q899 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC23.49■■□□□ 1.35
Ddx58Q6Q899 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC23.49■■□□□ 1.35
Ddx58Q6Q899 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC23.49■■□□□ 1.35
Ddx58Q6Q899 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC23.49■■□□□ 1.35
Ddx58Q6Q899 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
Ddx58Q6Q899 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC23.48■■□□□ 1.35
Ddx58Q6Q899 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC23.48■■□□□ 1.35
Ddx58Q6Q899 Gm13509-201ENSMUST00000119733 1308 ntBASIC23.48■■□□□ 1.35
Ddx58Q6Q899 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Ddx58Q6Q899 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC23.47■■□□□ 1.35
Ddx58Q6Q899 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Ddx58Q6Q899 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
Ddx58Q6Q899 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC23.47■■□□□ 1.35
Ddx58Q6Q899 Gm10653-202ENSMUST00000139570 835 ntBASIC23.47■■□□□ 1.35
Ddx58Q6Q899 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
Ddx58Q6Q899 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC23.47■■□□□ 1.35
Ddx58Q6Q899 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Ddx58Q6Q899 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
Ddx58Q6Q899 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
Ddx58Q6Q899 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Ddx58Q6Q899 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC23.47■■□□□ 1.35
Ddx58Q6Q899 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Ddx58Q6Q899 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC23.47■■□□□ 1.35
Ddx58Q6Q899 Gm19094-201ENSMUST00000209791 1246 ntBASIC23.46■■□□□ 1.35
Ddx58Q6Q899 Rab3c-203ENSMUST00000224180 967 ntBASIC23.46■■□□□ 1.35
Ddx58Q6Q899 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC23.46■■□□□ 1.35
Ddx58Q6Q899 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
Ddx58Q6Q899 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
Ddx58Q6Q899 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
Ddx58Q6Q899 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
Ddx58Q6Q899 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.35
Ddx58Q6Q899 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC23.45■■□□□ 1.34
Ddx58Q6Q899 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
Ddx58Q6Q899 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC23.45■■□□□ 1.34
Ddx58Q6Q899 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC23.45■■□□□ 1.34
Ddx58Q6Q899 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
Ddx58Q6Q899 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
Ddx58Q6Q899 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC23.44■■□□□ 1.34
Ddx58Q6Q899 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC23.44■■□□□ 1.34
Ddx58Q6Q899 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC23.44■■□□□ 1.34
Ddx58Q6Q899 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
Ddx58Q6Q899 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC23.44■■□□□ 1.34
Ddx58Q6Q899 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC23.44■■□□□ 1.34
Ddx58Q6Q899 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
Ddx58Q6Q899 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
Ddx58Q6Q899 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
Ddx58Q6Q899 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC23.43■■□□□ 1.34
Ddx58Q6Q899 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
Ddx58Q6Q899 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC23.43■■□□□ 1.34
Ddx58Q6Q899 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
Ddx58Q6Q899 Gm20049-201ENSMUST00000219950 730 ntBASIC23.43■■□□□ 1.34
Ddx58Q6Q899 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC23.43■■□□□ 1.34
Ddx58Q6Q899 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
Ddx58Q6Q899 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
Ddx58Q6Q899 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
Ddx58Q6Q899 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
Ddx58Q6Q899 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC23.42■■□□□ 1.34
Ddx58Q6Q899 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
Ddx58Q6Q899 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
Ddx58Q6Q899 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC23.42■■□□□ 1.34
Ddx58Q6Q899 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC23.42■■□□□ 1.34
Ddx58Q6Q899 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC23.42■■□□□ 1.34
Ddx58Q6Q899 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
Ddx58Q6Q899 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
Ddx58Q6Q899 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC23.42■■□□□ 1.34
Ddx58Q6Q899 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
Ddx58Q6Q899 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC23.41■■□□□ 1.34
Ddx58Q6Q899 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC23.41■■□□□ 1.34
Ddx58Q6Q899 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC23.41■■□□□ 1.34
Ddx58Q6Q899 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Ddx58Q6Q899 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC23.4■■□□□ 1.34
Ddx58Q6Q899 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
Ddx58Q6Q899 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC23.4■■□□□ 1.34
Ddx58Q6Q899 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC23.4■■□□□ 1.34
Ddx58Q6Q899 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC23.4■■□□□ 1.34
Ddx58Q6Q899 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Ddx58Q6Q899 Gm44672-201ENSMUST00000206944 1098 ntBASIC23.4■■□□□ 1.34
Ddx58Q6Q899 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Ddx58Q6Q899 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
Ddx58Q6Q899 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC23.4■■□□□ 1.34
Ddx58Q6Q899 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC23.4■■□□□ 1.34
Ddx58Q6Q899 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Ddx58Q6Q899 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Ddx58Q6Q899 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
Ddx58Q6Q899 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC23.39■■□□□ 1.34
Ddx58Q6Q899 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
Ddx58Q6Q899 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
Ddx58Q6Q899 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
Ddx58Q6Q899 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
Ddx58Q6Q899 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC23.39■■□□□ 1.33
Ddx58Q6Q899 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC23.39■■□□□ 1.33
Ddx58Q6Q899 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC23.39■■□□□ 1.33
Ddx58Q6Q899 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC23.38■■□□□ 1.33
Ddx58Q6Q899 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC23.38■■□□□ 1.33
Ddx58Q6Q899 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC23.38■■□□□ 1.33
Ddx58Q6Q899 Gm20760-201ENSMUST00000179197 648 ntBASIC23.38■■□□□ 1.33
Ddx58Q6Q899 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
Ddx58Q6Q899 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Ddx58Q6Q899 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
Ddx58Q6Q899 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
Retrieved 100 of 76,532 protein–RNA pairs in 55.8 ms