Protein–RNA interactions for Protein: Q6PDC0

Rundc3b, RUN domain-containing protein 3B, mousemouse

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rundc3bQ6PDC0 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Rundc3bQ6PDC0 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rundc3bQ6PDC0 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
Rundc3bQ6PDC0 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Rundc3bQ6PDC0 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Rundc3bQ6PDC0 Gm37352-201ENSMUST00000193908 2181 ntBASIC17.83■□□□□ 0.45
Rundc3bQ6PDC0 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Rundc3bQ6PDC0 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Rundc3bQ6PDC0 Gm15853-202ENSMUST00000195518 2041 ntBASIC17.83■□□□□ 0.45
Rundc3bQ6PDC0 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC17.83■□□□□ 0.44
Rundc3bQ6PDC0 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Rundc3bQ6PDC0 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Rundc3bQ6PDC0 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Rundc3bQ6PDC0 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
Rundc3bQ6PDC0 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC17.83■□□□□ 0.44
Rundc3bQ6PDC0 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
Rundc3bQ6PDC0 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Rundc3bQ6PDC0 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Rundc3bQ6PDC0 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
Rundc3bQ6PDC0 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC17.82■□□□□ 0.44
Rundc3bQ6PDC0 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rundc3bQ6PDC0 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rundc3bQ6PDC0 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rundc3bQ6PDC0 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rundc3bQ6PDC0 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Rundc3bQ6PDC0 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rundc3bQ6PDC0 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rundc3bQ6PDC0 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Rundc3bQ6PDC0 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Rundc3bQ6PDC0 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rundc3bQ6PDC0 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rundc3bQ6PDC0 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
Rundc3bQ6PDC0 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Rundc3bQ6PDC0 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Rundc3bQ6PDC0 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC17.81■□□□□ 0.44
Rundc3bQ6PDC0 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC17.81■□□□□ 0.44
Rundc3bQ6PDC0 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Rundc3bQ6PDC0 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rundc3bQ6PDC0 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rundc3bQ6PDC0 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rundc3bQ6PDC0 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC17.81■□□□□ 0.44
Rundc3bQ6PDC0 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rundc3bQ6PDC0 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Rundc3bQ6PDC0 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Rundc3bQ6PDC0 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC17.81■□□□□ 0.44
Rundc3bQ6PDC0 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rundc3bQ6PDC0 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Rundc3bQ6PDC0 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Rundc3bQ6PDC0 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Rundc3bQ6PDC0 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rundc3bQ6PDC0 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Rundc3bQ6PDC0 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rundc3bQ6PDC0 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rundc3bQ6PDC0 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rundc3bQ6PDC0 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC17.8■□□□□ 0.44
Rundc3bQ6PDC0 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rundc3bQ6PDC0 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rundc3bQ6PDC0 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC17.8■□□□□ 0.44
Rundc3bQ6PDC0 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC17.8■□□□□ 0.44
Rundc3bQ6PDC0 Gm43530-201ENSMUST00000195920 274 ntBASIC17.8■□□□□ 0.44
Rundc3bQ6PDC0 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rundc3bQ6PDC0 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Rundc3bQ6PDC0 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rundc3bQ6PDC0 AC123834.2-201ENSMUST00000224038 2340 ntBASIC17.8■□□□□ 0.44
Rundc3bQ6PDC0 Gm10571-201ENSMUST00000097869 1638 ntBASIC17.8■□□□□ 0.44
Rundc3bQ6PDC0 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rundc3bQ6PDC0 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rundc3bQ6PDC0 Dmtn-207ENSMUST00000228001 2437 ntBASIC17.79■□□□□ 0.44
Rundc3bQ6PDC0 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rundc3bQ6PDC0 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rundc3bQ6PDC0 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rundc3bQ6PDC0 Gm5067-201ENSMUST00000170449 1009 ntBASIC17.79■□□□□ 0.44
Rundc3bQ6PDC0 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rundc3bQ6PDC0 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC17.79■□□□□ 0.44
Rundc3bQ6PDC0 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Rundc3bQ6PDC0 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Rundc3bQ6PDC0 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rundc3bQ6PDC0 Gm37811-201ENSMUST00000192416 2601 ntBASIC17.78■□□□□ 0.44
Rundc3bQ6PDC0 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rundc3bQ6PDC0 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rundc3bQ6PDC0 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC17.78■□□□□ 0.44
Rundc3bQ6PDC0 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Rundc3bQ6PDC0 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC17.78■□□□□ 0.44
Rundc3bQ6PDC0 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Rundc3bQ6PDC0 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rundc3bQ6PDC0 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rundc3bQ6PDC0 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Rundc3bQ6PDC0 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Rundc3bQ6PDC0 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rundc3bQ6PDC0 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rundc3bQ6PDC0 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rundc3bQ6PDC0 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Rundc3bQ6PDC0 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Rundc3bQ6PDC0 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Rundc3bQ6PDC0 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rundc3bQ6PDC0 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC17.77■□□□□ 0.44
Rundc3bQ6PDC0 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
Rundc3bQ6PDC0 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rundc3bQ6PDC0 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Rundc3bQ6PDC0 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms