Protein–RNA interactions for Protein: Q640N4

Zfp248, Zinc finger protein 248, mousemouse

Predictions only

Length 576 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zfp248Q640N4 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Zfp248Q640N4 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Zfp248Q640N4 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC14.35□□□□□ -0.11
Zfp248Q640N4 Flvcr1-202ENSMUST00000191946 1216 ntBASIC14.35□□□□□ -0.11
Zfp248Q640N4 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Zfp248Q640N4 AC137127.1-201ENSMUST00000213466 1078 ntBASIC14.35□□□□□ -0.11
Zfp248Q640N4 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC14.35□□□□□ -0.11
Zfp248Q640N4 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC14.35□□□□□ -0.11
Zfp248Q640N4 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Zfp248Q640N4 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Zfp248Q640N4 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Zfp248Q640N4 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Zfp248Q640N4 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Zfp248Q640N4 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Zfp248Q640N4 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Zfp248Q640N4 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Zfp248Q640N4 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Zfp248Q640N4 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Zfp248Q640N4 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Zfp248Q640N4 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Zfp248Q640N4 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Zfp248Q640N4 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Zfp248Q640N4 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Zfp248Q640N4 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Zfp248Q640N4 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Zfp248Q640N4 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Zfp248Q640N4 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Zfp248Q640N4 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
Zfp248Q640N4 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC14.34□□□□□ -0.11
Zfp248Q640N4 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Zfp248Q640N4 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Zfp248Q640N4 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC14.34□□□□□ -0.11
Zfp248Q640N4 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC14.34□□□□□ -0.11
Zfp248Q640N4 Mir7075-201ENSMUST00000184187 82 ntBASIC14.34□□□□□ -0.11
Zfp248Q640N4 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Zfp248Q640N4 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Zfp248Q640N4 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
Zfp248Q640N4 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Zfp248Q640N4 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Zfp248Q640N4 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Zfp248Q640N4 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Zfp248Q640N4 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
Zfp248Q640N4 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
Zfp248Q640N4 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Zfp248Q640N4 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Zfp248Q640N4 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Zfp248Q640N4 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Zfp248Q640N4 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC14.33□□□□□ -0.12
Zfp248Q640N4 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Zfp248Q640N4 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Zfp248Q640N4 Gm11421-201ENSMUST00000122124 294 ntBASIC14.33□□□□□ -0.12
Zfp248Q640N4 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Zfp248Q640N4 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Zfp248Q640N4 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Zfp248Q640N4 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Zfp248Q640N4 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Zfp248Q640N4 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Zfp248Q640N4 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Zfp248Q640N4 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Zfp248Q640N4 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Zfp248Q640N4 Gm43231-201ENSMUST00000202960 2258 ntBASIC14.32□□□□□ -0.12
Zfp248Q640N4 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Zfp248Q640N4 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Zfp248Q640N4 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC14.32□□□□□ -0.12
Zfp248Q640N4 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Zfp248Q640N4 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Zfp248Q640N4 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
Zfp248Q640N4 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC14.32□□□□□ -0.12
Zfp248Q640N4 Gm12821-201ENSMUST00000120022 600 ntBASIC14.32□□□□□ -0.12
Zfp248Q640N4 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Zfp248Q640N4 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Zfp248Q640N4 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Zfp248Q640N4 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Zfp248Q640N4 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Zfp248Q640N4 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Zfp248Q640N4 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Zfp248Q640N4 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Zfp248Q640N4 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC14.31□□□□□ -0.12
Zfp248Q640N4 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Zfp248Q640N4 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Zfp248Q640N4 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Zfp248Q640N4 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Zfp248Q640N4 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Zfp248Q640N4 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Zfp248Q640N4 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Zfp248Q640N4 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
Zfp248Q640N4 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Zfp248Q640N4 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC14.31□□□□□ -0.12
Zfp248Q640N4 Wdr70-203ENSMUST00000227371 1130 ntBASIC14.31□□□□□ -0.12
Zfp248Q640N4 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Zfp248Q640N4 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Zfp248Q640N4 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC14.31□□□□□ -0.12
Zfp248Q640N4 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Zfp248Q640N4 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Zfp248Q640N4 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Zfp248Q640N4 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Zfp248Q640N4 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Zfp248Q640N4 Gm5540-201ENSMUST00000131852 1848 ntBASIC14.31□□□□□ -0.12
Zfp248Q640N4 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Zfp248Q640N4 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 18.4 ms