Protein–RNA interactions for Protein: Q62277

Syp, Synaptophysin, mousemouse

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SypQ62277 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
SypQ62277 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
SypQ62277 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
SypQ62277 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SypQ62277 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC17.7■□□□□ 0.42
SypQ62277 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SypQ62277 Gm7290-201ENSMUST00000104990 617 ntBASIC17.7■□□□□ 0.42
SypQ62277 Gm12918-201ENSMUST00000120234 636 ntBASIC17.7■□□□□ 0.42
SypQ62277 Gm15710-201ENSMUST00000121821 636 ntBASIC17.7■□□□□ 0.42
SypQ62277 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SypQ62277 Gm5075-201ENSMUST00000196916 622 ntBASIC17.7■□□□□ 0.42
SypQ62277 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC17.7■□□□□ 0.42
SypQ62277 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC17.7■□□□□ 0.42
SypQ62277 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
SypQ62277 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SypQ62277 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SypQ62277 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC17.7■□□□□ 0.42
SypQ62277 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
SypQ62277 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SypQ62277 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC17.69■□□□□ 0.42
SypQ62277 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SypQ62277 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SypQ62277 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SypQ62277 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SypQ62277 Nespas-201ENSMUST00000143738 1083 ntBASIC17.69■□□□□ 0.42
SypQ62277 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SypQ62277 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC17.69■□□□□ 0.42
SypQ62277 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SypQ62277 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
SypQ62277 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SypQ62277 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
SypQ62277 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
SypQ62277 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
SypQ62277 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SypQ62277 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
SypQ62277 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC17.68■□□□□ 0.42
SypQ62277 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SypQ62277 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SypQ62277 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SypQ62277 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC17.68■□□□□ 0.42
SypQ62277 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SypQ62277 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SypQ62277 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SypQ62277 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
SypQ62277 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SypQ62277 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SypQ62277 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SypQ62277 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
SypQ62277 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC17.67■□□□□ 0.42
SypQ62277 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SypQ62277 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
SypQ62277 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
SypQ62277 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SypQ62277 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC17.67■□□□□ 0.42
SypQ62277 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SypQ62277 Gm20760-201ENSMUST00000179197 648 ntBASIC17.67■□□□□ 0.42
SypQ62277 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SypQ62277 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC17.67■□□□□ 0.42
SypQ62277 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
SypQ62277 Golph3-205ENSMUST00000228671 2842 ntBASIC17.67■□□□□ 0.42
SypQ62277 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
SypQ62277 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SypQ62277 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC17.66■□□□□ 0.42
SypQ62277 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC17.66■□□□□ 0.42
SypQ62277 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC17.66■□□□□ 0.42
SypQ62277 Gm4968-201ENSMUST00000071458 858 ntBASIC17.66■□□□□ 0.42
SypQ62277 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SypQ62277 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
SypQ62277 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
SypQ62277 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC17.66■□□□□ 0.42
SypQ62277 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SypQ62277 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
SypQ62277 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SypQ62277 Gm13146-201ENSMUST00000118508 780 ntBASIC17.65■□□□□ 0.42
SypQ62277 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC17.65■□□□□ 0.42
SypQ62277 Gm5408-201ENSMUST00000197998 747 ntBASIC17.65■□□□□ 0.42
SypQ62277 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SypQ62277 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC17.65■□□□□ 0.42
SypQ62277 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC17.65■□□□□ 0.42
SypQ62277 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SypQ62277 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC17.65■□□□□ 0.42
SypQ62277 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
SypQ62277 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
SypQ62277 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
SypQ62277 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.42
SypQ62277 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.42
SypQ62277 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
SypQ62277 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SypQ62277 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SypQ62277 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SypQ62277 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
SypQ62277 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC17.64■□□□□ 0.41
SypQ62277 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SypQ62277 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SypQ62277 Gm42911-201ENSMUST00000199360 1630 ntBASIC17.64■□□□□ 0.41
SypQ62277 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
SypQ62277 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SypQ62277 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
SypQ62277 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SypQ62277 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 16.5 ms