Protein–RNA interactions for Protein: Q62233

Six3, Homeobox protein SIX3, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six3Q62233 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Six3Q62233 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Six3Q62233 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Six3Q62233 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC18.45■□□□□ 0.54
Six3Q62233 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Six3Q62233 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Six3Q62233 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
Six3Q62233 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC18.44■□□□□ 0.54
Six3Q62233 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Six3Q62233 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Six3Q62233 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Six3Q62233 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Six3Q62233 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
Six3Q62233 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC18.44■□□□□ 0.54
Six3Q62233 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
Six3Q62233 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
Six3Q62233 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Six3Q62233 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
Six3Q62233 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Six3Q62233 Fam105a-203ENSMUST00000226170 3043 ntBASIC18.43■□□□□ 0.54
Six3Q62233 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Six3Q62233 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Six3Q62233 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Six3Q62233 Gm45417-201ENSMUST00000209533 758 ntBASIC18.43■□□□□ 0.54
Six3Q62233 Gm6139-201ENSMUST00000079261 882 ntBASIC18.43■□□□□ 0.54
Six3Q62233 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Six3Q62233 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Six3Q62233 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Six3Q62233 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Six3Q62233 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Six3Q62233 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Six3Q62233 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Six3Q62233 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC18.42■□□□□ 0.54
Six3Q62233 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Six3Q62233 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Six3Q62233 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Six3Q62233 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC18.42■□□□□ 0.54
Six3Q62233 CT030146.1-201ENSMUST00000220919 217 ntBASIC18.42■□□□□ 0.54
Six3Q62233 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
Six3Q62233 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Six3Q62233 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Six3Q62233 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Six3Q62233 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Six3Q62233 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Six3Q62233 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC18.41■□□□□ 0.54
Six3Q62233 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Six3Q62233 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Six3Q62233 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Six3Q62233 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Six3Q62233 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Six3Q62233 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Six3Q62233 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Six3Q62233 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Six3Q62233 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Six3Q62233 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Six3Q62233 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC18.41■□□□□ 0.54
Six3Q62233 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Six3Q62233 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Six3Q62233 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Six3Q62233 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Six3Q62233 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Six3Q62233 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Six3Q62233 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Six3Q62233 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
Six3Q62233 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Six3Q62233 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Six3Q62233 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC18.4■□□□□ 0.54
Six3Q62233 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Six3Q62233 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC18.39■□□□□ 0.54
Six3Q62233 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Six3Q62233 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Six3Q62233 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Six3Q62233 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Six3Q62233 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Six3Q62233 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Six3Q62233 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Six3Q62233 Gm7860-201ENSMUST00000121190 879 ntBASIC18.39■□□□□ 0.53
Six3Q62233 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC18.39■□□□□ 0.53
Six3Q62233 Gm27801-201ENSMUST00000184174 223 ntBASIC18.39■□□□□ 0.53
Six3Q62233 Gm40848-201ENSMUST00000221998 324 ntBASIC18.39■□□□□ 0.53
Six3Q62233 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Six3Q62233 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Six3Q62233 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Six3Q62233 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Six3Q62233 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC18.39■□□□□ 0.53
Six3Q62233 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Six3Q62233 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Six3Q62233 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Six3Q62233 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Six3Q62233 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC18.38■□□□□ 0.53
Six3Q62233 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Six3Q62233 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Six3Q62233 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Six3Q62233 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Six3Q62233 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC18.38■□□□□ 0.53
Six3Q62233 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Six3Q62233 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Six3Q62233 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Six3Q62233 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Six3Q62233 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 17.6 ms