Protein–RNA interactions for Protein: Q61466

Smarcd1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1, mousemouse

Known RBP Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd1Q61466 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Smarcd1Q61466 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Smarcd1Q61466 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Smarcd1Q61466 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Smarcd1Q61466 Gm26971-201ENSMUST00000182423 1072 ntBASIC19.72■□□□□ 0.75
Smarcd1Q61466 AC124603.1-201ENSMUST00000223843 308 ntBASIC19.72■□□□□ 0.75
Smarcd1Q61466 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Smarcd1Q61466 Gm6365-201ENSMUST00000054711 744 ntBASIC19.72■□□□□ 0.75
Smarcd1Q61466 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Smarcd1Q61466 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Smarcd1Q61466 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Smarcd1Q61466 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Smarcd1Q61466 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Smarcd1Q61466 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Smarcd1Q61466 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Smarcd1Q61466 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Smarcd1Q61466 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC19.71■□□□□ 0.75
Smarcd1Q61466 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Smarcd1Q61466 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Smarcd1Q61466 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Smarcd1Q61466 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Smarcd1Q61466 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Smarcd1Q61466 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Smarcd1Q61466 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Smarcd1Q61466 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Smarcd1Q61466 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Smarcd1Q61466 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Smarcd1Q61466 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Smarcd1Q61466 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Smarcd1Q61466 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Smarcd1Q61466 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Smarcd1Q61466 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Smarcd1Q61466 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Smarcd1Q61466 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Smarcd1Q61466 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
Smarcd1Q61466 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Smarcd1Q61466 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Smarcd1Q61466 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
Smarcd1Q61466 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Smarcd1Q61466 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Smarcd1Q61466 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Smarcd1Q61466 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Smarcd1Q61466 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Smarcd1Q61466 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Smarcd1Q61466 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Smarcd1Q61466 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Smarcd1Q61466 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Smarcd1Q61466 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Smarcd1Q61466 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Smarcd1Q61466 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Smarcd1Q61466 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Smarcd1Q61466 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Smarcd1Q61466 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC19.69■□□□□ 0.74
Smarcd1Q61466 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Smarcd1Q61466 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Smarcd1Q61466 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Smarcd1Q61466 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC19.68■□□□□ 0.74
Smarcd1Q61466 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Smarcd1Q61466 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Smarcd1Q61466 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Smarcd1Q61466 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Smarcd1Q61466 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC19.68■□□□□ 0.74
Smarcd1Q61466 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC19.68■□□□□ 0.74
Smarcd1Q61466 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Smarcd1Q61466 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Smarcd1Q61466 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Smarcd1Q61466 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Smarcd1Q61466 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Smarcd1Q61466 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Smarcd1Q61466 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Smarcd1Q61466 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Smarcd1Q61466 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Smarcd1Q61466 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Smarcd1Q61466 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Smarcd1Q61466 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Smarcd1Q61466 Hsf1-204ENSMUST00000226872 2104 ntBASIC19.67■□□□□ 0.74
Smarcd1Q61466 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Smarcd1Q61466 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Smarcd1Q61466 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Smarcd1Q61466 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Smarcd1Q61466 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Smarcd1Q61466 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Smarcd1Q61466 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Smarcd1Q61466 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Smarcd1Q61466 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
Smarcd1Q61466 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC19.66■□□□□ 0.74
Smarcd1Q61466 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC19.66■□□□□ 0.74
Smarcd1Q61466 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC19.66■□□□□ 0.74
Smarcd1Q61466 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
Smarcd1Q61466 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Smarcd1Q61466 AC126028.2-201ENSMUST00000228100 1833 ntBASIC19.66■□□□□ 0.74
Smarcd1Q61466 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Smarcd1Q61466 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC19.65■□□□□ 0.74
Smarcd1Q61466 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC19.65■□□□□ 0.74
Smarcd1Q61466 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC19.65■□□□□ 0.74
Smarcd1Q61466 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Smarcd1Q61466 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Smarcd1Q61466 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Smarcd1Q61466 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Smarcd1Q61466 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 16.7 ms