Protein–RNA interactions for Protein: Q5R1I8

Trav3-1, T cell receptor alpha variable 3-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-1Q5R1I8 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav3-1Q5R1I8 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav3-1Q5R1I8 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav3-1Q5R1I8 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav3-1Q5R1I8 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav3-1Q5R1I8 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav3-1Q5R1I8 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trav3-1Q5R1I8 BC021767-201ENSMUST00000126387 1716 ntBASIC12.88□□□□□ -0.35
Trav3-1Q5R1I8 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Trav3-1Q5R1I8 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav3-1Q5R1I8 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav3-1Q5R1I8 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC12.87□□□□□ -0.35
Trav3-1Q5R1I8 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav3-1Q5R1I8 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trav3-1Q5R1I8 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Trav3-1Q5R1I8 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav3-1Q5R1I8 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trav3-1Q5R1I8 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav3-1Q5R1I8 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trav3-1Q5R1I8 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav3-1Q5R1I8 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav3-1Q5R1I8 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav3-1Q5R1I8 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav3-1Q5R1I8 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav3-1Q5R1I8 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trav3-1Q5R1I8 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
Trav3-1Q5R1I8 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav3-1Q5R1I8 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Trav3-1Q5R1I8 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trav3-1Q5R1I8 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC12.86□□□□□ -0.35
Trav3-1Q5R1I8 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav3-1Q5R1I8 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Trav3-1Q5R1I8 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trav3-1Q5R1I8 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav3-1Q5R1I8 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav3-1Q5R1I8 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trav3-1Q5R1I8 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav3-1Q5R1I8 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC12.86□□□□□ -0.35
Trav3-1Q5R1I8 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC12.86□□□□□ -0.35
Trav3-1Q5R1I8 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
Trav3-1Q5R1I8 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav3-1Q5R1I8 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trav3-1Q5R1I8 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav3-1Q5R1I8 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trav3-1Q5R1I8 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav3-1Q5R1I8 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav3-1Q5R1I8 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav3-1Q5R1I8 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trav3-1Q5R1I8 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav3-1Q5R1I8 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav3-1Q5R1I8 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav3-1Q5R1I8 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav3-1Q5R1I8 Gm43672-201ENSMUST00000199072 1731 ntBASIC12.85□□□□□ -0.35
Trav3-1Q5R1I8 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav3-1Q5R1I8 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav3-1Q5R1I8 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC12.85□□□□□ -0.35
Trav3-1Q5R1I8 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav3-1Q5R1I8 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trav3-1Q5R1I8 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Trav3-1Q5R1I8 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trav3-1Q5R1I8 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trav3-1Q5R1I8 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trav3-1Q5R1I8 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav3-1Q5R1I8 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav3-1Q5R1I8 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav3-1Q5R1I8 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav3-1Q5R1I8 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trav3-1Q5R1I8 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC12.85□□□□□ -0.35
Trav3-1Q5R1I8 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC12.85□□□□□ -0.35
Trav3-1Q5R1I8 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav3-1Q5R1I8 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav3-1Q5R1I8 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trav3-1Q5R1I8 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav3-1Q5R1I8 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Trav3-1Q5R1I8 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav3-1Q5R1I8 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav3-1Q5R1I8 Dancr-204ENSMUST00000132389 2347 ntBASIC12.84□□□□□ -0.35
Trav3-1Q5R1I8 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav3-1Q5R1I8 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC12.84□□□□□ -0.35
Trav3-1Q5R1I8 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav3-1Q5R1I8 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav3-1Q5R1I8 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav3-1Q5R1I8 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav3-1Q5R1I8 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trav3-1Q5R1I8 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav3-1Q5R1I8 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav3-1Q5R1I8 Gm30023-201ENSMUST00000197970 889 ntBASIC12.84□□□□□ -0.35
Trav3-1Q5R1I8 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav3-1Q5R1I8 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav3-1Q5R1I8 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav3-1Q5R1I8 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav3-1Q5R1I8 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav3-1Q5R1I8 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav3-1Q5R1I8 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav3-1Q5R1I8 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav3-1Q5R1I8 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav3-1Q5R1I8 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Trav3-1Q5R1I8 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Trav3-1Q5R1I8 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Trav3-1Q5R1I8 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 17.8 ms