Protein–RNA interactions for Protein: Q5R1I0

Trav6d-4, T cell receptor alpha variable 6D-4 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-4Q5R1I0 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav6d-4Q5R1I0 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav6d-4Q5R1I0 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC15.87■□□□□ 0.13
Trav6d-4Q5R1I0 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav6d-4Q5R1I0 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC15.87■□□□□ 0.13
Trav6d-4Q5R1I0 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav6d-4Q5R1I0 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav6d-4Q5R1I0 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav6d-4Q5R1I0 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC15.86■□□□□ 0.13
Trav6d-4Q5R1I0 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Trav6d-4Q5R1I0 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav6d-4Q5R1I0 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Trav6d-4Q5R1I0 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
Trav6d-4Q5R1I0 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC15.86■□□□□ 0.13
Trav6d-4Q5R1I0 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav6d-4Q5R1I0 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav6d-4Q5R1I0 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav6d-4Q5R1I0 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
Trav6d-4Q5R1I0 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
Trav6d-4Q5R1I0 Gm5540-201ENSMUST00000131852 1848 ntBASIC15.86■□□□□ 0.13
Trav6d-4Q5R1I0 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav6d-4Q5R1I0 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Trav6d-4Q5R1I0 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
Trav6d-4Q5R1I0 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav6d-4Q5R1I0 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav6d-4Q5R1I0 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav6d-4Q5R1I0 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav6d-4Q5R1I0 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Trav6d-4Q5R1I0 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Trav6d-4Q5R1I0 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
Trav6d-4Q5R1I0 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC15.85■□□□□ 0.13
Trav6d-4Q5R1I0 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav6d-4Q5R1I0 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav6d-4Q5R1I0 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Trav6d-4Q5R1I0 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav6d-4Q5R1I0 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC15.85■□□□□ 0.13
Trav6d-4Q5R1I0 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Trav6d-4Q5R1I0 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
Trav6d-4Q5R1I0 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav6d-4Q5R1I0 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
Trav6d-4Q5R1I0 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav6d-4Q5R1I0 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Trav6d-4Q5R1I0 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC15.85■□□□□ 0.13
Trav6d-4Q5R1I0 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
Trav6d-4Q5R1I0 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav6d-4Q5R1I0 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
Trav6d-4Q5R1I0 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav6d-4Q5R1I0 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav6d-4Q5R1I0 Gm7290-201ENSMUST00000104990 617 ntBASIC15.84■□□□□ 0.13
Trav6d-4Q5R1I0 Gm12918-201ENSMUST00000120234 636 ntBASIC15.84■□□□□ 0.13
Trav6d-4Q5R1I0 Gm15710-201ENSMUST00000121821 636 ntBASIC15.84■□□□□ 0.13
Trav6d-4Q5R1I0 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC15.84■□□□□ 0.13
Trav6d-4Q5R1I0 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav6d-4Q5R1I0 Gm5075-201ENSMUST00000196916 622 ntBASIC15.84■□□□□ 0.13
Trav6d-4Q5R1I0 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC15.84■□□□□ 0.13
Trav6d-4Q5R1I0 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC15.84■□□□□ 0.13
Trav6d-4Q5R1I0 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC15.84■□□□□ 0.13
Trav6d-4Q5R1I0 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Trav6d-4Q5R1I0 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav6d-4Q5R1I0 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
Trav6d-4Q5R1I0 AC131586.2-201ENSMUST00000228370 1512 ntBASIC15.84■□□□□ 0.13
Trav6d-4Q5R1I0 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Trav6d-4Q5R1I0 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.13
Trav6d-4Q5R1I0 Golph3-202ENSMUST00000226517 2359 ntBASIC15.83■□□□□ 0.12
Trav6d-4Q5R1I0 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
Trav6d-4Q5R1I0 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC15.83■□□□□ 0.12
Trav6d-4Q5R1I0 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Trav6d-4Q5R1I0 Gm26971-201ENSMUST00000182423 1072 ntBASIC15.83■□□□□ 0.12
Trav6d-4Q5R1I0 Gm5297-201ENSMUST00000198555 1171 ntBASIC15.83■□□□□ 0.12
Trav6d-4Q5R1I0 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trav6d-4Q5R1I0 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
Trav6d-4Q5R1I0 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trav6d-4Q5R1I0 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trav6d-4Q5R1I0 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Trav6d-4Q5R1I0 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trav6d-4Q5R1I0 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trav6d-4Q5R1I0 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC15.83■□□□□ 0.12
Trav6d-4Q5R1I0 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trav6d-4Q5R1I0 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav6d-4Q5R1I0 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav6d-4Q5R1I0 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav6d-4Q5R1I0 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Trav6d-4Q5R1I0 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav6d-4Q5R1I0 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav6d-4Q5R1I0 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC15.82■□□□□ 0.12
Trav6d-4Q5R1I0 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav6d-4Q5R1I0 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav6d-4Q5R1I0 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC15.82■□□□□ 0.12
Trav6d-4Q5R1I0 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav6d-4Q5R1I0 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav6d-4Q5R1I0 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav6d-4Q5R1I0 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC15.82■□□□□ 0.12
Trav6d-4Q5R1I0 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav6d-4Q5R1I0 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav6d-4Q5R1I0 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Trav6d-4Q5R1I0 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav6d-4Q5R1I0 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Trav6d-4Q5R1I0 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Trav6d-4Q5R1I0 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Trav6d-4Q5R1I0 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC15.82■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 77.5 ms