Protein–RNA interactions for Protein: Q5R1H9

Trav7d-4, T cell receptor alpha variable 7D-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7d-4Q5R1H9 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav7d-4Q5R1H9 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Trav7d-4Q5R1H9 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Trav7d-4Q5R1H9 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav7d-4Q5R1H9 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav7d-4Q5R1H9 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav7d-4Q5R1H9 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Trav7d-4Q5R1H9 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Trav7d-4Q5R1H9 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav7d-4Q5R1H9 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Trav7d-4Q5R1H9 Gm7332-201ENSMUST00000118351 454 ntBASIC14.43□□□□□ -0.1
Trav7d-4Q5R1H9 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC14.43□□□□□ -0.1
Trav7d-4Q5R1H9 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav7d-4Q5R1H9 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav7d-4Q5R1H9 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav7d-4Q5R1H9 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav7d-4Q5R1H9 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Trav7d-4Q5R1H9 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav7d-4Q5R1H9 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav7d-4Q5R1H9 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav7d-4Q5R1H9 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav7d-4Q5R1H9 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav7d-4Q5R1H9 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC14.42□□□□□ -0.1
Trav7d-4Q5R1H9 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav7d-4Q5R1H9 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav7d-4Q5R1H9 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav7d-4Q5R1H9 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
Trav7d-4Q5R1H9 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Trav7d-4Q5R1H9 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Trav7d-4Q5R1H9 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav7d-4Q5R1H9 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Trav7d-4Q5R1H9 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Trav7d-4Q5R1H9 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Trav7d-4Q5R1H9 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC14.42□□□□□ -0.1
Trav7d-4Q5R1H9 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav7d-4Q5R1H9 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav7d-4Q5R1H9 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Trav7d-4Q5R1H9 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Trav7d-4Q5R1H9 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav7d-4Q5R1H9 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC14.41□□□□□ -0.1
Trav7d-4Q5R1H9 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Trav7d-4Q5R1H9 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Trav7d-4Q5R1H9 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav7d-4Q5R1H9 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Trav7d-4Q5R1H9 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Trav7d-4Q5R1H9 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Trav7d-4Q5R1H9 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav7d-4Q5R1H9 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Trav7d-4Q5R1H9 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav7d-4Q5R1H9 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav7d-4Q5R1H9 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav7d-4Q5R1H9 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav7d-4Q5R1H9 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC14.4□□□□□ -0.1
Trav7d-4Q5R1H9 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav7d-4Q5R1H9 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Trav7d-4Q5R1H9 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC14.4□□□□□ -0.1
Trav7d-4Q5R1H9 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav7d-4Q5R1H9 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav7d-4Q5R1H9 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC14.4□□□□□ -0.1
Trav7d-4Q5R1H9 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav7d-4Q5R1H9 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav7d-4Q5R1H9 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav7d-4Q5R1H9 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav7d-4Q5R1H9 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Trav7d-4Q5R1H9 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav7d-4Q5R1H9 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav7d-4Q5R1H9 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Trav7d-4Q5R1H9 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav7d-4Q5R1H9 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC14.4□□□□□ -0.1
Trav7d-4Q5R1H9 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav7d-4Q5R1H9 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Trav7d-4Q5R1H9 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC14.39□□□□□ -0.11
Trav7d-4Q5R1H9 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav7d-4Q5R1H9 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav7d-4Q5R1H9 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav7d-4Q5R1H9 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trav7d-4Q5R1H9 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC14.39□□□□□ -0.11
Trav7d-4Q5R1H9 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Trav7d-4Q5R1H9 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav7d-4Q5R1H9 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trav7d-4Q5R1H9 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav7d-4Q5R1H9 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trav7d-4Q5R1H9 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Trav7d-4Q5R1H9 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav7d-4Q5R1H9 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trav7d-4Q5R1H9 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav7d-4Q5R1H9 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav7d-4Q5R1H9 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav7d-4Q5R1H9 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav7d-4Q5R1H9 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trav7d-4Q5R1H9 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav7d-4Q5R1H9 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav7d-4Q5R1H9 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Trav7d-4Q5R1H9 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav7d-4Q5R1H9 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav7d-4Q5R1H9 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav7d-4Q5R1H9 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trav7d-4Q5R1H9 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav7d-4Q5R1H9 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC14.38□□□□□ -0.11
Trav7d-4Q5R1H9 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms