Protein–RNA interactions for Protein: Q5R1D2

Trav15-1-dv6-1, T cell receptor alpha variable 15-1-DV6-1 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-1-dv6-1Q5R1D2 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav15-1-dv6-1Q5R1D2 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
Trav15-1-dv6-1Q5R1D2 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Trav15-1-dv6-1Q5R1D2 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Trav15-1-dv6-1Q5R1D2 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Trav15-1-dv6-1Q5R1D2 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC14.71□□□□□ -0.06
Trav15-1-dv6-1Q5R1D2 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC14.71□□□□□ -0.06
Trav15-1-dv6-1Q5R1D2 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav15-1-dv6-1Q5R1D2 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav15-1-dv6-1Q5R1D2 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav15-1-dv6-1Q5R1D2 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Trav15-1-dv6-1Q5R1D2 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav15-1-dv6-1Q5R1D2 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC14.7□□□□□ -0.06
Trav15-1-dv6-1Q5R1D2 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav15-1-dv6-1Q5R1D2 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC14.7□□□□□ -0.06
Trav15-1-dv6-1Q5R1D2 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav15-1-dv6-1Q5R1D2 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Trav15-1-dv6-1Q5R1D2 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Trav15-1-dv6-1Q5R1D2 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav15-1-dv6-1Q5R1D2 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC14.7□□□□□ -0.06
Trav15-1-dv6-1Q5R1D2 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
Trav15-1-dv6-1Q5R1D2 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Trav15-1-dv6-1Q5R1D2 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC14.7□□□□□ -0.06
Trav15-1-dv6-1Q5R1D2 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav15-1-dv6-1Q5R1D2 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Trav15-1-dv6-1Q5R1D2 Gm32699-201ENSMUST00000221728 1988 ntBASIC14.69□□□□□ -0.06
Trav15-1-dv6-1Q5R1D2 Gm5953-201ENSMUST00000220644 2616 ntBASIC14.69□□□□□ -0.06
Trav15-1-dv6-1Q5R1D2 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav15-1-dv6-1Q5R1D2 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav15-1-dv6-1Q5R1D2 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav15-1-dv6-1Q5R1D2 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Trav15-1-dv6-1Q5R1D2 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav15-1-dv6-1Q5R1D2 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC14.69□□□□□ -0.06
Trav15-1-dv6-1Q5R1D2 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC14.69□□□□□ -0.06
Trav15-1-dv6-1Q5R1D2 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC14.69□□□□□ -0.06
Trav15-1-dv6-1Q5R1D2 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav15-1-dv6-1Q5R1D2 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav15-1-dv6-1Q5R1D2 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav15-1-dv6-1Q5R1D2 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav15-1-dv6-1Q5R1D2 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav15-1-dv6-1Q5R1D2 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav15-1-dv6-1Q5R1D2 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav15-1-dv6-1Q5R1D2 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav15-1-dv6-1Q5R1D2 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Trav15-1-dv6-1Q5R1D2 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Trav15-1-dv6-1Q5R1D2 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Trav15-1-dv6-1Q5R1D2 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav15-1-dv6-1Q5R1D2 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav15-1-dv6-1Q5R1D2 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
Trav15-1-dv6-1Q5R1D2 Gm18755-201ENSMUST00000218030 1099 ntBASIC14.68□□□□□ -0.06
Trav15-1-dv6-1Q5R1D2 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Trav15-1-dv6-1Q5R1D2 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav15-1-dv6-1Q5R1D2 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav15-1-dv6-1Q5R1D2 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Trav15-1-dv6-1Q5R1D2 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav15-1-dv6-1Q5R1D2 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav15-1-dv6-1Q5R1D2 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Trav15-1-dv6-1Q5R1D2 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC14.67□□□□□ -0.06
Trav15-1-dv6-1Q5R1D2 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav15-1-dv6-1Q5R1D2 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC14.67□□□□□ -0.06
Trav15-1-dv6-1Q5R1D2 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav15-1-dv6-1Q5R1D2 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Trav15-1-dv6-1Q5R1D2 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav15-1-dv6-1Q5R1D2 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav15-1-dv6-1Q5R1D2 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav15-1-dv6-1Q5R1D2 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
Trav15-1-dv6-1Q5R1D2 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav15-1-dv6-1Q5R1D2 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
Trav15-1-dv6-1Q5R1D2 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav15-1-dv6-1Q5R1D2 Gm45141-201ENSMUST00000206502 1888 ntBASIC14.67□□□□□ -0.06
Trav15-1-dv6-1Q5R1D2 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav15-1-dv6-1Q5R1D2 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav15-1-dv6-1Q5R1D2 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Trav15-1-dv6-1Q5R1D2 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav15-1-dv6-1Q5R1D2 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav15-1-dv6-1Q5R1D2 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Trav15-1-dv6-1Q5R1D2 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav15-1-dv6-1Q5R1D2 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav15-1-dv6-1Q5R1D2 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav15-1-dv6-1Q5R1D2 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Trav15-1-dv6-1Q5R1D2 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Trav15-1-dv6-1Q5R1D2 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav15-1-dv6-1Q5R1D2 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav15-1-dv6-1Q5R1D2 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Trav15-1-dv6-1Q5R1D2 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav15-1-dv6-1Q5R1D2 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Trav15-1-dv6-1Q5R1D2 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC14.66□□□□□ -0.06
Trav15-1-dv6-1Q5R1D2 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC14.66□□□□□ -0.06
Trav15-1-dv6-1Q5R1D2 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav15-1-dv6-1Q5R1D2 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav15-1-dv6-1Q5R1D2 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav15-1-dv6-1Q5R1D2 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav15-1-dv6-1Q5R1D2 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav15-1-dv6-1Q5R1D2 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav15-1-dv6-1Q5R1D2 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav15-1-dv6-1Q5R1D2 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav15-1-dv6-1Q5R1D2 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav15-1-dv6-1Q5R1D2 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav15-1-dv6-1Q5R1D2 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Trav15-1-dv6-1Q5R1D2 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 204.3 ms