Protein–RNA interactions for Protein: Q56A07

Scn2b, Sodium channel subunit beta-2, mousemouse

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn2bQ56A07 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Scn2bQ56A07 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Scn2bQ56A07 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Scn2bQ56A07 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Scn2bQ56A07 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Scn2bQ56A07 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Scn2bQ56A07 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Scn2bQ56A07 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC18.68■□□□□ 0.58
Scn2bQ56A07 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Scn2bQ56A07 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Scn2bQ56A07 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Scn2bQ56A07 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Scn2bQ56A07 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Scn2bQ56A07 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Scn2bQ56A07 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Scn2bQ56A07 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
Scn2bQ56A07 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Scn2bQ56A07 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Scn2bQ56A07 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Scn2bQ56A07 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Scn2bQ56A07 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Scn2bQ56A07 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Scn2bQ56A07 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Scn2bQ56A07 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC18.66■□□□□ 0.58
Scn2bQ56A07 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC18.66■□□□□ 0.58
Scn2bQ56A07 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Scn2bQ56A07 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC18.66■□□□□ 0.58
Scn2bQ56A07 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Scn2bQ56A07 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Scn2bQ56A07 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Scn2bQ56A07 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Scn2bQ56A07 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC18.66■□□□□ 0.58
Scn2bQ56A07 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Scn2bQ56A07 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC18.66■□□□□ 0.58
Scn2bQ56A07 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Scn2bQ56A07 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Scn2bQ56A07 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Scn2bQ56A07 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Scn2bQ56A07 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Scn2bQ56A07 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC18.65■□□□□ 0.58
Scn2bQ56A07 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Scn2bQ56A07 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Scn2bQ56A07 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC18.65■□□□□ 0.58
Scn2bQ56A07 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
Scn2bQ56A07 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Scn2bQ56A07 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Scn2bQ56A07 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Scn2bQ56A07 Gm5953-201ENSMUST00000220644 2616 ntBASIC18.65■□□□□ 0.58
Scn2bQ56A07 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Scn2bQ56A07 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Scn2bQ56A07 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Scn2bQ56A07 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Scn2bQ56A07 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
Scn2bQ56A07 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Scn2bQ56A07 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC18.64■□□□□ 0.57
Scn2bQ56A07 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Scn2bQ56A07 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Scn2bQ56A07 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
Scn2bQ56A07 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Scn2bQ56A07 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Scn2bQ56A07 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Scn2bQ56A07 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Scn2bQ56A07 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Scn2bQ56A07 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Scn2bQ56A07 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC18.64■□□□□ 0.57
Scn2bQ56A07 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Scn2bQ56A07 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Scn2bQ56A07 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Scn2bQ56A07 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Scn2bQ56A07 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Scn2bQ56A07 Gm12251-201ENSMUST00000117893 792 ntBASIC18.63■□□□□ 0.57
Scn2bQ56A07 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC18.63■□□□□ 0.57
Scn2bQ56A07 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Scn2bQ56A07 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Scn2bQ56A07 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Scn2bQ56A07 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Scn2bQ56A07 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Scn2bQ56A07 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Scn2bQ56A07 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Scn2bQ56A07 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Scn2bQ56A07 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Scn2bQ56A07 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Scn2bQ56A07 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Scn2bQ56A07 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Scn2bQ56A07 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Scn2bQ56A07 Gm43017-201ENSMUST00000198296 752 ntBASIC18.62■□□□□ 0.57
Scn2bQ56A07 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Scn2bQ56A07 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Scn2bQ56A07 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Scn2bQ56A07 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Scn2bQ56A07 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Scn2bQ56A07 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Scn2bQ56A07 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Scn2bQ56A07 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC18.61■□□□□ 0.57
Scn2bQ56A07 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Scn2bQ56A07 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Scn2bQ56A07 Dmtn-210ENSMUST00000228824 2377 ntBASIC18.61■□□□□ 0.57
Scn2bQ56A07 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Scn2bQ56A07 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Scn2bQ56A07 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 16.5 ms