Protein–RNA interactions for Protein: Q3V061

Trim80, Tripartite motif-containing 80, mousemouse

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim80Q3V061 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trim80Q3V061 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC19.42■□□□□ 0.7
Trim80Q3V061 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trim80Q3V061 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trim80Q3V061 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Trim80Q3V061 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trim80Q3V061 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC19.42■□□□□ 0.7
Trim80Q3V061 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trim80Q3V061 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Trim80Q3V061 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trim80Q3V061 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC19.42■□□□□ 0.7
Trim80Q3V061 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC19.42■□□□□ 0.7
Trim80Q3V061 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trim80Q3V061 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC19.42■□□□□ 0.7
Trim80Q3V061 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC19.42■□□□□ 0.7
Trim80Q3V061 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trim80Q3V061 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Trim80Q3V061 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trim80Q3V061 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trim80Q3V061 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Trim80Q3V061 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC19.41■□□□□ 0.7
Trim80Q3V061 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC19.41■□□□□ 0.7
Trim80Q3V061 Gm20100-201ENSMUST00000209418 2272 ntBASIC19.41■□□□□ 0.7
Trim80Q3V061 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Trim80Q3V061 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trim80Q3V061 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Trim80Q3V061 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trim80Q3V061 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Trim80Q3V061 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC19.41■□□□□ 0.7
Trim80Q3V061 Gm2011-201ENSMUST00000203124 1263 ntBASIC19.41■□□□□ 0.7
Trim80Q3V061 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trim80Q3V061 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Trim80Q3V061 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Trim80Q3V061 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trim80Q3V061 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Trim80Q3V061 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trim80Q3V061 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Trim80Q3V061 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Trim80Q3V061 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trim80Q3V061 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trim80Q3V061 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trim80Q3V061 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trim80Q3V061 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trim80Q3V061 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Trim80Q3V061 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Trim80Q3V061 Gm21168-201ENSMUST00000199646 1096 ntBASIC19.4■□□□□ 0.7
Trim80Q3V061 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trim80Q3V061 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trim80Q3V061 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trim80Q3V061 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trim80Q3V061 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC19.4■□□□□ 0.7
Trim80Q3V061 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trim80Q3V061 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trim80Q3V061 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trim80Q3V061 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
Trim80Q3V061 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Trim80Q3V061 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC19.39■□□□□ 0.7
Trim80Q3V061 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC19.39■□□□□ 0.7
Trim80Q3V061 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Trim80Q3V061 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trim80Q3V061 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Trim80Q3V061 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC19.39■□□□□ 0.69
Trim80Q3V061 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trim80Q3V061 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trim80Q3V061 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Trim80Q3V061 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trim80Q3V061 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Trim80Q3V061 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trim80Q3V061 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trim80Q3V061 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC19.38■□□□□ 0.69
Trim80Q3V061 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trim80Q3V061 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Trim80Q3V061 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Trim80Q3V061 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC19.38■□□□□ 0.69
Trim80Q3V061 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trim80Q3V061 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC19.38■□□□□ 0.69
Trim80Q3V061 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Trim80Q3V061 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trim80Q3V061 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trim80Q3V061 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC19.37■□□□□ 0.69
Trim80Q3V061 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC19.37■□□□□ 0.69
Trim80Q3V061 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trim80Q3V061 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trim80Q3V061 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trim80Q3V061 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trim80Q3V061 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Trim80Q3V061 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Trim80Q3V061 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Trim80Q3V061 Gm19439-201ENSMUST00000198195 2273 ntBASIC19.37■□□□□ 0.69
Trim80Q3V061 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trim80Q3V061 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trim80Q3V061 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Trim80Q3V061 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trim80Q3V061 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Trim80Q3V061 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trim80Q3V061 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC19.36■□□□□ 0.69
Trim80Q3V061 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trim80Q3V061 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trim80Q3V061 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trim80Q3V061 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC19.36■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms