Protein–RNA interactions for Protein: Q3UW12

Cnga4, Cyclic nucleotide-gated cation channel alpha-4, mousemouse

Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cnga4Q3UW12 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC19.2■□□□□ 0.66
Cnga4Q3UW12 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cnga4Q3UW12 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cnga4Q3UW12 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Cnga4Q3UW12 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Cnga4Q3UW12 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
Cnga4Q3UW12 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Cnga4Q3UW12 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cnga4Q3UW12 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cnga4Q3UW12 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cnga4Q3UW12 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
Cnga4Q3UW12 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Cnga4Q3UW12 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC19.19■□□□□ 0.66
Cnga4Q3UW12 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cnga4Q3UW12 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cnga4Q3UW12 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cnga4Q3UW12 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cnga4Q3UW12 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cnga4Q3UW12 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Cnga4Q3UW12 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Cnga4Q3UW12 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cnga4Q3UW12 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cnga4Q3UW12 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cnga4Q3UW12 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Cnga4Q3UW12 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cnga4Q3UW12 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC19.18■□□□□ 0.66
Cnga4Q3UW12 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC19.18■□□□□ 0.66
Cnga4Q3UW12 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC19.18■□□□□ 0.66
Cnga4Q3UW12 Gm42939-201ENSMUST00000197514 2205 ntBASIC19.18■□□□□ 0.66
Cnga4Q3UW12 Gm44832-201ENSMUST00000208849 2303 ntBASIC19.18■□□□□ 0.66
Cnga4Q3UW12 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cnga4Q3UW12 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cnga4Q3UW12 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cnga4Q3UW12 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Cnga4Q3UW12 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cnga4Q3UW12 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cnga4Q3UW12 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC19.17■□□□□ 0.66
Cnga4Q3UW12 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cnga4Q3UW12 Gm18755-201ENSMUST00000218030 1099 ntBASIC19.17■□□□□ 0.66
Cnga4Q3UW12 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cnga4Q3UW12 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cnga4Q3UW12 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Cnga4Q3UW12 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cnga4Q3UW12 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cnga4Q3UW12 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cnga4Q3UW12 Gm45606-201ENSMUST00000209836 2795 ntBASIC19.16■□□□□ 0.66
Cnga4Q3UW12 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cnga4Q3UW12 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Cnga4Q3UW12 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cnga4Q3UW12 Krt8-ps-201ENSMUST00000208495 945 ntBASIC19.16■□□□□ 0.66
Cnga4Q3UW12 Gm15853-202ENSMUST00000195518 2041 ntBASIC19.16■□□□□ 0.66
Cnga4Q3UW12 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Cnga4Q3UW12 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Cnga4Q3UW12 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Cnga4Q3UW12 Gm42900-201ENSMUST00000197184 2167 ntBASIC19.16■□□□□ 0.66
Cnga4Q3UW12 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cnga4Q3UW12 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cnga4Q3UW12 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cnga4Q3UW12 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cnga4Q3UW12 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Cnga4Q3UW12 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cnga4Q3UW12 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cnga4Q3UW12 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Cnga4Q3UW12 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Cnga4Q3UW12 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC19.15■□□□□ 0.66
Cnga4Q3UW12 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cnga4Q3UW12 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Cnga4Q3UW12 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cnga4Q3UW12 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
Cnga4Q3UW12 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cnga4Q3UW12 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.66
Cnga4Q3UW12 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
Cnga4Q3UW12 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cnga4Q3UW12 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Cnga4Q3UW12 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cnga4Q3UW12 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Cnga4Q3UW12 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cnga4Q3UW12 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cnga4Q3UW12 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cnga4Q3UW12 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Cnga4Q3UW12 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC19.13■□□□□ 0.65
Cnga4Q3UW12 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cnga4Q3UW12 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC19.13■□□□□ 0.65
Cnga4Q3UW12 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cnga4Q3UW12 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cnga4Q3UW12 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC19.13■□□□□ 0.65
Cnga4Q3UW12 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cnga4Q3UW12 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Cnga4Q3UW12 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cnga4Q3UW12 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cnga4Q3UW12 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cnga4Q3UW12 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Cnga4Q3UW12 Gm42911-201ENSMUST00000199360 1630 ntBASIC19.13■□□□□ 0.65
Cnga4Q3UW12 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cnga4Q3UW12 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cnga4Q3UW12 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cnga4Q3UW12 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cnga4Q3UW12 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cnga4Q3UW12 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cnga4Q3UW12 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms