Protein–RNA interactions for Protein: Q3UHC2

Lrrk1, Leucine-rich repeat serine/threonine-protein kinase 1, mousemouse

Predictions only

Length 2,014 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrrk1Q3UHC2 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Lrrk1Q3UHC2 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Lrrk1Q3UHC2 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Lrrk1Q3UHC2 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
Lrrk1Q3UHC2 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Lrrk1Q3UHC2 Gm15853-202ENSMUST00000195518 2041 ntBASIC17.58■□□□□ 0.4
Lrrk1Q3UHC2 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Lrrk1Q3UHC2 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Lrrk1Q3UHC2 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Lrrk1Q3UHC2 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Lrrk1Q3UHC2 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Lrrk1Q3UHC2 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC17.57■□□□□ 0.4
Lrrk1Q3UHC2 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Lrrk1Q3UHC2 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Lrrk1Q3UHC2 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Lrrk1Q3UHC2 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Lrrk1Q3UHC2 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC17.57■□□□□ 0.4
Lrrk1Q3UHC2 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC17.57■□□□□ 0.4
Lrrk1Q3UHC2 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Lrrk1Q3UHC2 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Lrrk1Q3UHC2 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Lrrk1Q3UHC2 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Lrrk1Q3UHC2 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Lrrk1Q3UHC2 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Lrrk1Q3UHC2 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Lrrk1Q3UHC2 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Lrrk1Q3UHC2 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Lrrk1Q3UHC2 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Lrrk1Q3UHC2 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Lrrk1Q3UHC2 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Lrrk1Q3UHC2 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Lrrk1Q3UHC2 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC17.56■□□□□ 0.4
Lrrk1Q3UHC2 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Lrrk1Q3UHC2 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Lrrk1Q3UHC2 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Lrrk1Q3UHC2 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Lrrk1Q3UHC2 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
Lrrk1Q3UHC2 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC17.55■□□□□ 0.4
Lrrk1Q3UHC2 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Lrrk1Q3UHC2 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Lrrk1Q3UHC2 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC17.55■□□□□ 0.4
Lrrk1Q3UHC2 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Lrrk1Q3UHC2 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Lrrk1Q3UHC2 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Lrrk1Q3UHC2 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC17.55■□□□□ 0.4
Lrrk1Q3UHC2 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Lrrk1Q3UHC2 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Lrrk1Q3UHC2 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Lrrk1Q3UHC2 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Lrrk1Q3UHC2 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Lrrk1Q3UHC2 AC131586.2-201ENSMUST00000228370 1512 ntBASIC17.55■□□□□ 0.4
Lrrk1Q3UHC2 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Lrrk1Q3UHC2 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Lrrk1Q3UHC2 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Lrrk1Q3UHC2 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Lrrk1Q3UHC2 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Lrrk1Q3UHC2 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Lrrk1Q3UHC2 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Lrrk1Q3UHC2 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Lrrk1Q3UHC2 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Lrrk1Q3UHC2 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Lrrk1Q3UHC2 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Lrrk1Q3UHC2 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC17.54■□□□□ 0.4
Lrrk1Q3UHC2 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Lrrk1Q3UHC2 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Lrrk1Q3UHC2 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Lrrk1Q3UHC2 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Lrrk1Q3UHC2 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Lrrk1Q3UHC2 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Lrrk1Q3UHC2 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Lrrk1Q3UHC2 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Lrrk1Q3UHC2 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Lrrk1Q3UHC2 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC17.53■□□□□ 0.4
Lrrk1Q3UHC2 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Lrrk1Q3UHC2 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC17.53■□□□□ 0.4
Lrrk1Q3UHC2 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC17.53■□□□□ 0.4
Lrrk1Q3UHC2 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Lrrk1Q3UHC2 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Lrrk1Q3UHC2 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
Lrrk1Q3UHC2 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Lrrk1Q3UHC2 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Lrrk1Q3UHC2 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Lrrk1Q3UHC2 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC17.52■□□□□ 0.4
Lrrk1Q3UHC2 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Lrrk1Q3UHC2 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Lrrk1Q3UHC2 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Lrrk1Q3UHC2 Gm10653-202ENSMUST00000139570 835 ntBASIC17.52■□□□□ 0.39
Lrrk1Q3UHC2 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC17.52■□□□□ 0.39
Lrrk1Q3UHC2 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Lrrk1Q3UHC2 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Lrrk1Q3UHC2 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC17.51■□□□□ 0.39
Lrrk1Q3UHC2 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Lrrk1Q3UHC2 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Lrrk1Q3UHC2 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Lrrk1Q3UHC2 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Lrrk1Q3UHC2 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Lrrk1Q3UHC2 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Lrrk1Q3UHC2 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Lrrk1Q3UHC2 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Lrrk1Q3UHC2 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms