Protein–RNA interactions for Protein: Q3TYP4

Tmem88b, Transmembrane protein 88B, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmem88bQ3TYP4 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC15.71■□□□□ 0.1
Tmem88bQ3TYP4 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Tmem88bQ3TYP4 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Tmem88bQ3TYP4 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Tmem88bQ3TYP4 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC15.7■□□□□ 0.1
Tmem88bQ3TYP4 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Tmem88bQ3TYP4 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Tmem88bQ3TYP4 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC15.7■□□□□ 0.1
Tmem88bQ3TYP4 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Tmem88bQ3TYP4 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
Tmem88bQ3TYP4 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC15.7■□□□□ 0.1
Tmem88bQ3TYP4 Gm2559-201ENSMUST00000201323 363 ntBASIC15.7■□□□□ 0.1
Tmem88bQ3TYP4 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Tmem88bQ3TYP4 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC15.7■□□□□ 0.1
Tmem88bQ3TYP4 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Tmem88bQ3TYP4 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Tmem88bQ3TYP4 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC15.7■□□□□ 0.1
Tmem88bQ3TYP4 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Tmem88bQ3TYP4 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Tmem88bQ3TYP4 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC15.7■□□□□ 0.1
Tmem88bQ3TYP4 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Tmem88bQ3TYP4 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Tmem88bQ3TYP4 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Tmem88bQ3TYP4 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Tmem88bQ3TYP4 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Tmem88bQ3TYP4 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC15.69■□□□□ 0.1
Tmem88bQ3TYP4 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Tmem88bQ3TYP4 Gm13509-201ENSMUST00000119733 1308 ntBASIC15.68■□□□□ 0.1
Tmem88bQ3TYP4 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
Tmem88bQ3TYP4 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Tmem88bQ3TYP4 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Tmem88bQ3TYP4 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Tmem88bQ3TYP4 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC15.68■□□□□ 0.1
Tmem88bQ3TYP4 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Tmem88bQ3TYP4 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Tmem88bQ3TYP4 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Tmem88bQ3TYP4 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC15.68■□□□□ 0.1
Tmem88bQ3TYP4 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Tmem88bQ3TYP4 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Tmem88bQ3TYP4 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Tmem88bQ3TYP4 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Tmem88bQ3TYP4 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Tmem88bQ3TYP4 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Tmem88bQ3TYP4 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Tmem88bQ3TYP4 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Tmem88bQ3TYP4 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
Tmem88bQ3TYP4 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Tmem88bQ3TYP4 Gm7860-201ENSMUST00000121190 879 ntBASIC15.67■□□□□ 0.1
Tmem88bQ3TYP4 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Tmem88bQ3TYP4 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Tmem88bQ3TYP4 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Tmem88bQ3TYP4 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Tmem88bQ3TYP4 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Tmem88bQ3TYP4 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Tmem88bQ3TYP4 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Tmem88bQ3TYP4 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Tmem88bQ3TYP4 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Tmem88bQ3TYP4 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Tmem88bQ3TYP4 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Tmem88bQ3TYP4 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC15.66■□□□□ 0.1
Tmem88bQ3TYP4 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Tmem88bQ3TYP4 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Tmem88bQ3TYP4 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Tmem88bQ3TYP4 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Tmem88bQ3TYP4 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
Tmem88bQ3TYP4 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Tmem88bQ3TYP4 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC15.66■□□□□ 0.1
Tmem88bQ3TYP4 AC154649.1-201ENSMUST00000227392 384 ntBASIC15.66■□□□□ 0.1
Tmem88bQ3TYP4 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC15.66■□□□□ 0.1
Tmem88bQ3TYP4 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Tmem88bQ3TYP4 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Tmem88bQ3TYP4 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Tmem88bQ3TYP4 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Tmem88bQ3TYP4 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Tmem88bQ3TYP4 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Tmem88bQ3TYP4 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Tmem88bQ3TYP4 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Tmem88bQ3TYP4 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Tmem88bQ3TYP4 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Tmem88bQ3TYP4 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Tmem88bQ3TYP4 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Tmem88bQ3TYP4 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Tmem88bQ3TYP4 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Tmem88bQ3TYP4 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Tmem88bQ3TYP4 Gm29994-201ENSMUST00000195495 1193 ntBASIC15.65■□□□□ 0.1
Tmem88bQ3TYP4 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Tmem88bQ3TYP4 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC15.65■□□□□ 0.1
Tmem88bQ3TYP4 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Tmem88bQ3TYP4 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Tmem88bQ3TYP4 Gm10616-201ENSMUST00000205285 2127 ntBASIC15.65■□□□□ 0.1
Tmem88bQ3TYP4 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Tmem88bQ3TYP4 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Tmem88bQ3TYP4 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Tmem88bQ3TYP4 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Tmem88bQ3TYP4 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.1
Tmem88bQ3TYP4 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Tmem88bQ3TYP4 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Tmem88bQ3TYP4 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Tmem88bQ3TYP4 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Tmem88bQ3TYP4 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC15.64■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 16.3 ms