Protein–RNA interactions for Protein: Q3LRV9

Treml4, Trem-like transcript 4 protein, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Treml4Q3LRV9 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Treml4Q3LRV9 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Treml4Q3LRV9 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Treml4Q3LRV9 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Treml4Q3LRV9 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Treml4Q3LRV9 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Treml4Q3LRV9 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Treml4Q3LRV9 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Treml4Q3LRV9 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Treml4Q3LRV9 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Treml4Q3LRV9 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC17.68■□□□□ 0.42
Treml4Q3LRV9 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Treml4Q3LRV9 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Treml4Q3LRV9 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC17.68■□□□□ 0.42
Treml4Q3LRV9 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Treml4Q3LRV9 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Treml4Q3LRV9 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Treml4Q3LRV9 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Treml4Q3LRV9 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC17.68■□□□□ 0.42
Treml4Q3LRV9 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Treml4Q3LRV9 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Treml4Q3LRV9 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Treml4Q3LRV9 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Treml4Q3LRV9 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC17.67■□□□□ 0.42
Treml4Q3LRV9 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Treml4Q3LRV9 Gm7977-201ENSMUST00000193787 748 ntBASIC17.67■□□□□ 0.42
Treml4Q3LRV9 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC17.67■□□□□ 0.42
Treml4Q3LRV9 AC154266.1-201ENSMUST00000223190 503 ntBASIC17.67■□□□□ 0.42
Treml4Q3LRV9 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Treml4Q3LRV9 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Treml4Q3LRV9 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Treml4Q3LRV9 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Treml4Q3LRV9 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Treml4Q3LRV9 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC17.66■□□□□ 0.42
Treml4Q3LRV9 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Treml4Q3LRV9 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Treml4Q3LRV9 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Treml4Q3LRV9 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC17.66■□□□□ 0.42
Treml4Q3LRV9 Gm13181-201ENSMUST00000120117 1069 ntBASIC17.66■□□□□ 0.42
Treml4Q3LRV9 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Treml4Q3LRV9 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Treml4Q3LRV9 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Treml4Q3LRV9 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Treml4Q3LRV9 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Treml4Q3LRV9 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Treml4Q3LRV9 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Treml4Q3LRV9 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Treml4Q3LRV9 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC17.65■□□□□ 0.42
Treml4Q3LRV9 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Treml4Q3LRV9 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Treml4Q3LRV9 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Treml4Q3LRV9 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
Treml4Q3LRV9 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC17.65■□□□□ 0.42
Treml4Q3LRV9 Mir6982-201ENSMUST00000184354 68 ntBASIC17.65■□□□□ 0.42
Treml4Q3LRV9 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Treml4Q3LRV9 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Treml4Q3LRV9 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Treml4Q3LRV9 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC17.65■□□□□ 0.42
Treml4Q3LRV9 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Treml4Q3LRV9 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Treml4Q3LRV9 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Treml4Q3LRV9 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Treml4Q3LRV9 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.42
Treml4Q3LRV9 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC17.64■□□□□ 0.42
Treml4Q3LRV9 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Treml4Q3LRV9 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Treml4Q3LRV9 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC17.64■□□□□ 0.41
Treml4Q3LRV9 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC17.64■□□□□ 0.41
Treml4Q3LRV9 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC17.64■□□□□ 0.41
Treml4Q3LRV9 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC17.64■□□□□ 0.41
Treml4Q3LRV9 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Treml4Q3LRV9 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Treml4Q3LRV9 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Treml4Q3LRV9 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Treml4Q3LRV9 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Treml4Q3LRV9 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Treml4Q3LRV9 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Treml4Q3LRV9 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Treml4Q3LRV9 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Treml4Q3LRV9 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC17.63■□□□□ 0.41
Treml4Q3LRV9 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC17.63■□□□□ 0.41
Treml4Q3LRV9 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Treml4Q3LRV9 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Treml4Q3LRV9 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Treml4Q3LRV9 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Treml4Q3LRV9 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Treml4Q3LRV9 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Treml4Q3LRV9 Gm29241-201ENSMUST00000189260 1096 ntBASIC17.63■□□□□ 0.41
Treml4Q3LRV9 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Treml4Q3LRV9 Gm44672-201ENSMUST00000206944 1098 ntBASIC17.63■□□□□ 0.41
Treml4Q3LRV9 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Treml4Q3LRV9 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Treml4Q3LRV9 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC17.63■□□□□ 0.41
Treml4Q3LRV9 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Treml4Q3LRV9 AC124392.1-201ENSMUST00000225172 5324 ntBASIC17.63■□□□□ 0.41
Treml4Q3LRV9 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Treml4Q3LRV9 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Treml4Q3LRV9 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Treml4Q3LRV9 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Treml4Q3LRV9 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 15.8 ms