Protein–RNA interactions for Protein: Q08109

HRD1, ERAD-associated E3 ubiquitin-protein ligase HRD1, yeastyeast

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
HRD1Q08109 YHL005CYHL005C 393 nt2.53□□□□□ -2
HRD1Q08109 RPL27AYHR010W 411 nt2.53□□□□□ -2
HRD1Q08109 PAN5YHR063C 1140 nt2.53□□□□□ -2
HRD1Q08109 TIF34YMR146C 1044 nt2.53□□□□□ -2
HRD1Q08109 CYC2YOR037W 1101 nt2.53□□□□□ -2
HRD1Q08109 RPA43YOR340C 981 nt2.53□□□□□ -2
HRD1Q08109 STE23YLR389C 3084 nt2.53□□□□□ -2.01
HRD1Q08109 POL31YJR006W 1464 nt2.52□□□□□ -2.01
HRD1Q08109 NET1YJL076W 3570 nt2.52□□□□□ -2.01
HRD1Q08109 TDA1YMR291W 1761 nt2.52□□□□□ -2.01
HRD1Q08109 RPC11YDR045C 333 nt2.52□□□□□ -2.01
HRD1Q08109 RPL1BYGL135W 654 nt2.52□□□□□ -2.01
HRD1Q08109 MRPS35YGR165W 1038 nt2.52□□□□□ -2.01
HRD1Q08109 PBA1YLR199C 831 nt2.52□□□□□ -2.01
HRD1Q08109 CDA2YLR308W 939 nt2.52□□□□□ -2.01
HRD1Q08109 SFH1YLR321C 1281 nt2.52□□□□□ -2.01
HRD1Q08109 SPP382YLR424W 2127 nt2.52□□□□□ -2.01
HRD1Q08109 CPR3YML078W 549 nt2.52□□□□□ -2.01
HRD1Q08109 ATP11YNL315C 957 nt2.52□□□□□ -2.01
HRD1Q08109 RPL1AYPL220W 654 nt2.52□□□□□ -2.01
HRD1Q08109 ANT1YPR128C 987 nt2.52□□□□□ -2.01
HRD1Q08109 snR42snR42 351 nt2.52□□□□□ -2.01
HRD1Q08109 YIL092WYIL092W 1902 nt2.52□□□□□ -2.01
HRD1Q08109 CEX1YOR112W 2286 nt2.52□□□□□ -2.01
HRD1Q08109 DBP5YOR046C 1449 nt2.51□□□□□ -2.01
HRD1Q08109 PDC2YDR081C 2778 nt2.51□□□□□ -2.01
HRD1Q08109 AEP2YMR282C 1743 nt2.51□□□□□ -2.01
HRD1Q08109 UBP14YBR058C 2346 nt2.51□□□□□ -2.01
HRD1Q08109 YCL068CYCL068C 783 nt2.51□□□□□ -2.01
HRD1Q08109 RPS29BYDL061C 171 nt2.51□□□□□ -2.01
HRD1Q08109 SUP56tL(CAA)A 82 nt2.51□□□□□ -2.01
HRD1Q08109 SUP53tL(CAA)C 82 nt2.51□□□□□ -2.01
HRD1Q08109 tL(CAA)DtL(CAA)D 82 nt2.51□□□□□ -2.01
HRD1Q08109 tL(CAA)G1tL(CAA)G1 82 nt2.51□□□□□ -2.01
HRD1Q08109 SUP54tL(CAA)G2 82 nt2.51□□□□□ -2.01
HRD1Q08109 tL(CAA)G3tL(CAA)G3 82 nt2.51□□□□□ -2.01
HRD1Q08109 tL(CAA)KtL(CAA)K 82 nt2.51□□□□□ -2.01
HRD1Q08109 tL(CAA)LtL(CAA)L 82 nt2.51□□□□□ -2.01
HRD1Q08109 tL(CAA)MtL(CAA)M 82 nt2.51□□□□□ -2.01
HRD1Q08109 tL(CAA)NtL(CAA)N 82 nt2.51□□□□□ -2.01
HRD1Q08109 DAL2YIR029W 1032 nt2.51□□□□□ -2.01
HRD1Q08109 ATP12YJL180C 978 nt2.51□□□□□ -2.01
HRD1Q08109 TTI2YJR136C 1266 nt2.51□□□□□ -2.01
HRD1Q08109 RPL6AYML073C 531 nt2.51□□□□□ -2.01
HRD1Q08109 HHF1YBR009C 312 nt2.51□□□□□ -2.01
HRD1Q08109 OXR1YPL196W 822 nt2.51□□□□□ -2.01
HRD1Q08109 YBR242WYBR242W 717 nt2.51□□□□□ -2.01
HRD1Q08109 SDS23YGL056C 1584 nt2.51□□□□□ -2.01
HRD1Q08109 TOM70YNL121C 1854 nt2.51□□□□□ -2.01
HRD1Q08109 NFT1YKR103W 3657 nt2.5□□□□□ -2.01
HRD1Q08109 REG1YDR028C 3045 nt2.5□□□□□ -2.01
HRD1Q08109 MTH1YDR277C 1302 nt2.5□□□□□ -2.01
HRD1Q08109 YOR296WYOR296W 3870 nt2.5□□□□□ -2.01
HRD1Q08109 GRX6YDL010W 696 nt2.5□□□□□ -2.01
HRD1Q08109 PAU10YDR542W 363 nt2.5□□□□□ -2.01
HRD1Q08109 MOB2YFL034C-B 864 nt2.5□□□□□ -2.01
HRD1Q08109 TOS8YGL096W 831 nt2.5□□□□□ -2.01
HRD1Q08109 PAU11YGL261C 363 nt2.5□□□□□ -2.01
HRD1Q08109 PAU13YHL046C 363 nt2.5□□□□□ -2.01
HRD1Q08109 SPO12YHR152W 522 nt2.5□□□□□ -2.01
HRD1Q08109 YIR014WYIR014W 729 nt2.5□□□□□ -2.01
HRD1Q08109 PIR1YKL164C 1026 nt2.5□□□□□ -2.01
HRD1Q08109 AHP1YLR109W 531 nt2.5□□□□□ -2.01
HRD1Q08109 PAU4YLR461W 363 nt2.5□□□□□ -2.01
HRD1Q08109 YPR027CYPR027C 834 nt2.5□□□□□ -2.01
HRD1Q08109 MCM16YPR046W 546 nt2.5□□□□□ -2.01
HRD1Q08109 PMR1YGL167C 2853 nt2.5□□□□□ -2.01
HRD1Q08109 YLR278CYLR278C 4026 nt2.5□□□□□ -2.01
HRD1Q08109 RGC1YPR115W 3252 nt2.5□□□□□ -2.01
HRD1Q08109 DSL1YNL258C 2265 nt2.49□□□□□ -2.01
HRD1Q08109 YPK3YBR028C 1578 nt2.49□□□□□ -2.01
HRD1Q08109 AGA1YNR044W 2178 nt2.49□□□□□ -2.01
HRD1Q08109 RMD1YDL001W 1293 nt2.49□□□□□ -2.01
HRD1Q08109 ERP3YDL018C 678 nt2.49□□□□□ -2.01
HRD1Q08109 TGL2YDR058C 981 nt2.49□□□□□ -2.01
HRD1Q08109 GPP2YER062C 753 nt2.49□□□□□ -2.01
HRD1Q08109 PET130YJL023C 1044 nt2.49□□□□□ -2.01
HRD1Q08109 IME1YJR094C 1083 nt2.49□□□□□ -2.01
HRD1Q08109 GMH1YKR030W 822 nt2.49□□□□□ -2.01
HRD1Q08109 AIM39YOL053W 1188 nt2.49□□□□□ -2.01
HRD1Q08109 YOL079WYOL079W 399 nt2.49□□□□□ -2.01
HRD1Q08109 USV1YPL230W 1176 nt2.49□□□□□ -2.01
HRD1Q08109 PHO88YBR106W 567 nt2.49□□□□□ -2.01
HRD1Q08109 GAT2YMR136W 1683 nt2.49□□□□□ -2.01
HRD1Q08109 NMD2YHR077C 3270 nt2.49□□□□□ -2.01
HRD1Q08109 MRS2YOR334W 1413 nt2.49□□□□□ -2.01
HRD1Q08109 TRA1YHR099W 11235 nt2.49□□□□□ -2.01
HRD1Q08109 SOK1YDR006C 2706 nt2.48□□□□□ -2.01
HRD1Q08109 ECM29YHL030W 5607 nt2.48□□□□□ -2.01
HRD1Q08109 ESC1YMR219W 4977 nt2.48□□□□□ -2.01
HRD1Q08109 PAM1YDR251W 2493 nt2.48□□□□□ -2.01
HRD1Q08109 EXO84YBR102C 2262 nt2.48□□□□□ -2.01
HRD1Q08109 DTD1YDL219W 453 nt2.48□□□□□ -2.01
HRD1Q08109 FIN1YDR130C 876 nt2.48□□□□□ -2.01
HRD1Q08109 SDT1YGL224C 843 nt2.48□□□□□ -2.01
HRD1Q08109 SDS3YIL084C 984 nt2.48□□□□□ -2.01
HRD1Q08109 GTT2YLL060C 702 nt2.48□□□□□ -2.01
HRD1Q08109 HHF2YNL030W 312 nt2.48□□□□□ -2.01
HRD1Q08109 DIM1YPL266W 957 nt2.48□□□□□ -2.01
HRD1Q08109 YIL169CYIL169C 2988 nt2.47□□□□□ -2.01
Retrieved 100 of 7,029 protein–RNA pairs in 20.4 ms