Protein–RNA interactions for Protein: P63058

Thra, Thyroid hormone receptor alpha, mousemouse

Predictions only

Length 492 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ThraP63058 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC19.04■□□□□ 0.64
ThraP63058 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
ThraP63058 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
ThraP63058 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
ThraP63058 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
ThraP63058 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
ThraP63058 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
ThraP63058 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
ThraP63058 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
ThraP63058 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
ThraP63058 Gm14281-201ENSMUST00000121700 1294 ntBASIC19.03■□□□□ 0.64
ThraP63058 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC19.03■□□□□ 0.64
ThraP63058 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
ThraP63058 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC19.03■□□□□ 0.64
ThraP63058 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
ThraP63058 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
ThraP63058 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
ThraP63058 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
ThraP63058 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
ThraP63058 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
ThraP63058 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
ThraP63058 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
ThraP63058 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC19.02■□□□□ 0.64
ThraP63058 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
ThraP63058 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
ThraP63058 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
ThraP63058 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
ThraP63058 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
ThraP63058 Gm9988-201ENSMUST00000069786 435 ntBASIC19.02■□□□□ 0.64
ThraP63058 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
ThraP63058 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
ThraP63058 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.63
ThraP63058 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
ThraP63058 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.63
ThraP63058 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC19.01■□□□□ 0.63
ThraP63058 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
ThraP63058 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
ThraP63058 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
ThraP63058 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC19.01■□□□□ 0.63
ThraP63058 Gm43231-201ENSMUST00000202960 2258 ntBASIC19.01■□□□□ 0.63
ThraP63058 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC19.01■□□□□ 0.63
ThraP63058 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
ThraP63058 AC126028.2-201ENSMUST00000228100 1833 ntBASIC19.01■□□□□ 0.63
ThraP63058 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
ThraP63058 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
ThraP63058 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
ThraP63058 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
ThraP63058 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
ThraP63058 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
ThraP63058 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC19■□□□□ 0.63
ThraP63058 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC19■□□□□ 0.63
ThraP63058 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC19■□□□□ 0.63
ThraP63058 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC19■□□□□ 0.63
ThraP63058 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
ThraP63058 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
ThraP63058 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC19■□□□□ 0.63
ThraP63058 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
ThraP63058 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
ThraP63058 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
ThraP63058 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
ThraP63058 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
ThraP63058 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
ThraP63058 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
ThraP63058 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC18.99■□□□□ 0.63
ThraP63058 Gm27801-201ENSMUST00000184174 223 ntBASIC18.99■□□□□ 0.63
ThraP63058 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC18.99■□□□□ 0.63
ThraP63058 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
ThraP63058 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
ThraP63058 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC18.99■□□□□ 0.63
ThraP63058 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
ThraP63058 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
ThraP63058 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
ThraP63058 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
ThraP63058 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
ThraP63058 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
ThraP63058 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
ThraP63058 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
ThraP63058 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC18.98■□□□□ 0.63
ThraP63058 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
ThraP63058 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC18.98■□□□□ 0.63
ThraP63058 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
ThraP63058 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
ThraP63058 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
ThraP63058 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
ThraP63058 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
ThraP63058 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
ThraP63058 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
ThraP63058 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
ThraP63058 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
ThraP63058 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC18.97■□□□□ 0.63
ThraP63058 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC18.97■□□□□ 0.63
ThraP63058 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
ThraP63058 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
ThraP63058 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
ThraP63058 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC18.97■□□□□ 0.63
ThraP63058 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
ThraP63058 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC18.97■□□□□ 0.63
ThraP63058 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
ThraP63058 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
ThraP63058 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 13.4 ms