Protein–RNA interactions for Protein: P56484

Ccr8, C-C chemokine receptor type 8, mousemouse

Predictions only

Length 353 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccr8P56484 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ccr8P56484 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ccr8P56484 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ccr8P56484 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Ccr8P56484 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC16.22■□□□□ 0.19
Ccr8P56484 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ccr8P56484 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC16.22■□□□□ 0.19
Ccr8P56484 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ccr8P56484 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ccr8P56484 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC16.22■□□□□ 0.19
Ccr8P56484 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ccr8P56484 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Ccr8P56484 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Ccr8P56484 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ccr8P56484 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ccr8P56484 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ccr8P56484 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ccr8P56484 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Ccr8P56484 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Ccr8P56484 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ccr8P56484 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ccr8P56484 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Ccr8P56484 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ccr8P56484 Gm5540-201ENSMUST00000131852 1848 ntBASIC16.21■□□□□ 0.19
Ccr8P56484 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Ccr8P56484 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC16.21■□□□□ 0.19
Ccr8P56484 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Ccr8P56484 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
Ccr8P56484 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Ccr8P56484 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Ccr8P56484 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Ccr8P56484 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.18
Ccr8P56484 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ccr8P56484 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Ccr8P56484 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC16.2■□□□□ 0.18
Ccr8P56484 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ccr8P56484 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Ccr8P56484 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC16.2■□□□□ 0.18
Ccr8P56484 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ccr8P56484 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Ccr8P56484 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ccr8P56484 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ccr8P56484 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Ccr8P56484 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ccr8P56484 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ccr8P56484 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ccr8P56484 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ccr8P56484 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Ccr8P56484 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC16.19■□□□□ 0.18
Ccr8P56484 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ccr8P56484 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ccr8P56484 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Ccr8P56484 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ccr8P56484 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ccr8P56484 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Ccr8P56484 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ccr8P56484 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Ccr8P56484 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ccr8P56484 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ccr8P56484 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Ccr8P56484 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Ccr8P56484 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ccr8P56484 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ccr8P56484 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Ccr8P56484 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ccr8P56484 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Ccr8P56484 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ccr8P56484 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC16.18■□□□□ 0.18
Ccr8P56484 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ccr8P56484 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ccr8P56484 Gm9988-201ENSMUST00000069786 435 ntBASIC16.18■□□□□ 0.18
Ccr8P56484 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Ccr8P56484 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
Ccr8P56484 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ccr8P56484 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Ccr8P56484 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Ccr8P56484 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ccr8P56484 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ccr8P56484 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC16.17■□□□□ 0.18
Ccr8P56484 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC16.17■□□□□ 0.18
Ccr8P56484 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Ccr8P56484 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ccr8P56484 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ccr8P56484 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ccr8P56484 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ccr8P56484 AC126028.2-201ENSMUST00000228100 1833 ntBASIC16.17■□□□□ 0.18
Ccr8P56484 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Ccr8P56484 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Ccr8P56484 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ccr8P56484 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ccr8P56484 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Ccr8P56484 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC16.16■□□□□ 0.18
Ccr8P56484 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC16.16■□□□□ 0.18
Ccr8P56484 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Ccr8P56484 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
Ccr8P56484 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Ccr8P56484 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ccr8P56484 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC16.16■□□□□ 0.18
Ccr8P56484 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Ccr8P56484 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms