Protein–RNA interactions for Protein: P52927

Hmga2, High mobility group protein HMGI-C, mousemouse

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmga2P52927 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Hmga2P52927 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Hmga2P52927 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Hmga2P52927 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Hmga2P52927 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Hmga2P52927 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Hmga2P52927 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Hmga2P52927 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Hmga2P52927 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Hmga2P52927 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC16.07■□□□□ 0.16
Hmga2P52927 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Hmga2P52927 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Hmga2P52927 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Hmga2P52927 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Hmga2P52927 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
Hmga2P52927 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Hmga2P52927 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Hmga2P52927 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Hmga2P52927 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Hmga2P52927 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Hmga2P52927 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Hmga2P52927 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Hmga2P52927 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC16.06■□□□□ 0.16
Hmga2P52927 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC16.06■□□□□ 0.16
Hmga2P52927 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Hmga2P52927 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Hmga2P52927 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Hmga2P52927 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
Hmga2P52927 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Hmga2P52927 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Hmga2P52927 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Hmga2P52927 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Hmga2P52927 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC16.06■□□□□ 0.16
Hmga2P52927 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Hmga2P52927 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC16.05■□□□□ 0.16
Hmga2P52927 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Hmga2P52927 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Hmga2P52927 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Hmga2P52927 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC16.05■□□□□ 0.16
Hmga2P52927 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Hmga2P52927 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC16.05■□□□□ 0.16
Hmga2P52927 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC16.05■□□□□ 0.16
Hmga2P52927 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC16.05■□□□□ 0.16
Hmga2P52927 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Hmga2P52927 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Hmga2P52927 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Hmga2P52927 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Hmga2P52927 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC16.05■□□□□ 0.16
Hmga2P52927 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Hmga2P52927 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Hmga2P52927 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Hmga2P52927 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Hmga2P52927 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Hmga2P52927 Gm37811-201ENSMUST00000192416 2601 ntBASIC16.04■□□□□ 0.16
Hmga2P52927 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Hmga2P52927 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Hmga2P52927 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Hmga2P52927 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Hmga2P52927 Gm22238-201ENSMUST00000175222 88 ntBASIC16.04■□□□□ 0.16
Hmga2P52927 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Hmga2P52927 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Hmga2P52927 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Hmga2P52927 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Hmga2P52927 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Hmga2P52927 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Hmga2P52927 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Hmga2P52927 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Hmga2P52927 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Hmga2P52927 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC16.03■□□□□ 0.16
Hmga2P52927 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC16.03■□□□□ 0.16
Hmga2P52927 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Hmga2P52927 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Hmga2P52927 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Hmga2P52927 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Hmga2P52927 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Hmga2P52927 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Hmga2P52927 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Hmga2P52927 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Hmga2P52927 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Hmga2P52927 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
Hmga2P52927 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Hmga2P52927 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC16.02■□□□□ 0.16
Hmga2P52927 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Hmga2P52927 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Hmga2P52927 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
Hmga2P52927 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Hmga2P52927 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC16.02■□□□□ 0.15
Hmga2P52927 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.15
Hmga2P52927 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Hmga2P52927 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Hmga2P52927 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Hmga2P52927 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Hmga2P52927 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Hmga2P52927 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Hmga2P52927 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Hmga2P52927 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Hmga2P52927 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Hmga2P52927 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC16.01■□□□□ 0.15
Hmga2P52927 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Hmga2P52927 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC16.01■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms