Protein–RNA interactions for Protein: P50220

Nkx2-1, Homeobox protein Nkx-2.1, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-1P50220 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Nkx2-1P50220 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Nkx2-1P50220 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC15.66■□□□□ 0.1
Nkx2-1P50220 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Nkx2-1P50220 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Nkx2-1P50220 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC15.66■□□□□ 0.1
Nkx2-1P50220 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC15.66■□□□□ 0.1
Nkx2-1P50220 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Nkx2-1P50220 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC15.66■□□□□ 0.1
Nkx2-1P50220 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Nkx2-1P50220 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Nkx2-1P50220 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Nkx2-1P50220 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Nkx2-1P50220 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Nkx2-1P50220 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Nkx2-1P50220 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Nkx2-1P50220 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Nkx2-1P50220 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC15.66■□□□□ 0.1
Nkx2-1P50220 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC15.66■□□□□ 0.1
Nkx2-1P50220 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Nkx2-1P50220 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Nkx2-1P50220 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Nkx2-1P50220 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Nkx2-1P50220 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Nkx2-1P50220 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Nkx2-1P50220 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Nkx2-1P50220 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Nkx2-1P50220 Etf1-202ENSMUST00000180351 108 ntBASIC15.65■□□□□ 0.1
Nkx2-1P50220 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC15.65■□□□□ 0.1
Nkx2-1P50220 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC15.65■□□□□ 0.1
Nkx2-1P50220 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Nkx2-1P50220 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Nkx2-1P50220 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Nkx2-1P50220 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Nkx2-1P50220 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Nkx2-1P50220 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Nkx2-1P50220 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Nkx2-1P50220 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.1
Nkx2-1P50220 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Nkx2-1P50220 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Nkx2-1P50220 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Nkx2-1P50220 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Nkx2-1P50220 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC15.64■□□□□ 0.09
Nkx2-1P50220 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Nkx2-1P50220 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC15.64■□□□□ 0.09
Nkx2-1P50220 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Nkx2-1P50220 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Nkx2-1P50220 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Nkx2-1P50220 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Nkx2-1P50220 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC15.64■□□□□ 0.09
Nkx2-1P50220 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Nkx2-1P50220 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Nkx2-1P50220 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC15.64■□□□□ 0.09
Nkx2-1P50220 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Nkx2-1P50220 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Nkx2-1P50220 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Nkx2-1P50220 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Nkx2-1P50220 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC15.63■□□□□ 0.09
Nkx2-1P50220 Gm37352-201ENSMUST00000193908 2181 ntBASIC15.63■□□□□ 0.09
Nkx2-1P50220 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Nkx2-1P50220 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Nkx2-1P50220 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC15.63■□□□□ 0.09
Nkx2-1P50220 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Nkx2-1P50220 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Nkx2-1P50220 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Nkx2-1P50220 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC15.63■□□□□ 0.09
Nkx2-1P50220 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Nkx2-1P50220 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Nkx2-1P50220 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Nkx2-1P50220 Gm9870-201ENSMUST00000063874 645 ntBASIC15.63■□□□□ 0.09
Nkx2-1P50220 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Nkx2-1P50220 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Nkx2-1P50220 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Nkx2-1P50220 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Nkx2-1P50220 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Nkx2-1P50220 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Nkx2-1P50220 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Nkx2-1P50220 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC15.63■□□□□ 0.09
Nkx2-1P50220 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Nkx2-1P50220 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Nkx2-1P50220 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Nkx2-1P50220 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Nkx2-1P50220 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Nkx2-1P50220 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
Nkx2-1P50220 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Nkx2-1P50220 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Nkx2-1P50220 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Nkx2-1P50220 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
Nkx2-1P50220 Gm10657-201ENSMUST00000193528 1031 ntBASIC15.62■□□□□ 0.09
Nkx2-1P50220 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC15.62■□□□□ 0.09
Nkx2-1P50220 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Nkx2-1P50220 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Nkx2-1P50220 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Nkx2-1P50220 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
Nkx2-1P50220 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Nkx2-1P50220 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Nkx2-1P50220 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC15.62■□□□□ 0.09
Nkx2-1P50220 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC15.62■□□□□ 0.09
Nkx2-1P50220 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Nkx2-1P50220 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms