Protein–RNA interactions for Protein: P47806

Gli1, Zinc finger protein GLI1, mousemouse

Predictions only

Length 1,111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gli1P47806 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Gli1P47806 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Gli1P47806 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC18.37■□□□□ 0.53
Gli1P47806 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Gli1P47806 Gm18688-201ENSMUST00000204695 1859 ntBASIC18.37■□□□□ 0.53
Gli1P47806 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Gli1P47806 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Gli1P47806 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Gli1P47806 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Gli1P47806 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Gli1P47806 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Gli1P47806 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Gli1P47806 Rncr4-201ENSMUST00000194541 2234 ntBASIC18.36■□□□□ 0.53
Gli1P47806 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Gli1P47806 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Gli1P47806 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Gli1P47806 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Gli1P47806 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Gli1P47806 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Gli1P47806 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Gli1P47806 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Gli1P47806 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC18.35■□□□□ 0.53
Gli1P47806 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Gli1P47806 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Gli1P47806 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Gli1P47806 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Gli1P47806 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Gli1P47806 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Gli1P47806 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Gli1P47806 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Gli1P47806 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Gli1P47806 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Gli1P47806 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Gli1P47806 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Gli1P47806 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Gli1P47806 Gm43060-201ENSMUST00000200621 289 ntBASIC18.34■□□□□ 0.53
Gli1P47806 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC18.34■□□□□ 0.53
Gli1P47806 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Gli1P47806 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Gli1P47806 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Gli1P47806 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Gli1P47806 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Gli1P47806 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
Gli1P47806 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Gli1P47806 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC18.34■□□□□ 0.53
Gli1P47806 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Gli1P47806 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Gli1P47806 Gm27045-201ENSMUST00000182145 1402 ntBASIC18.33■□□□□ 0.53
Gli1P47806 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC18.33■□□□□ 0.53
Gli1P47806 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
Gli1P47806 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
Gli1P47806 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
Gli1P47806 Gm10493-201ENSMUST00000097270 612 ntBASIC18.33■□□□□ 0.52
Gli1P47806 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC18.33■□□□□ 0.52
Gli1P47806 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Gli1P47806 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC18.33■□□□□ 0.52
Gli1P47806 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Gli1P47806 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Gli1P47806 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Gli1P47806 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Gli1P47806 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Gli1P47806 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Gli1P47806 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Gli1P47806 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Gli1P47806 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Gli1P47806 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Gli1P47806 BC021767-201ENSMUST00000126387 1716 ntBASIC18.32■□□□□ 0.52
Gli1P47806 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Gli1P47806 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Gli1P47806 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Gli1P47806 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Gli1P47806 Gm26571-201ENSMUST00000181399 666 ntBASIC18.32■□□□□ 0.52
Gli1P47806 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC18.32■□□□□ 0.52
Gli1P47806 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC18.32■□□□□ 0.52
Gli1P47806 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Gli1P47806 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Gli1P47806 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Gli1P47806 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Gli1P47806 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Gli1P47806 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC18.32■□□□□ 0.52
Gli1P47806 Gm6085-201ENSMUST00000182774 1470 ntBASIC18.32■□□□□ 0.52
Gli1P47806 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Gli1P47806 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Gli1P47806 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Gli1P47806 Gm6627-201ENSMUST00000218299 2386 ntBASIC18.31■□□□□ 0.52
Gli1P47806 Gm27405-201ENSMUST00000184201 112 ntBASIC18.31■□□□□ 0.52
Gli1P47806 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC18.31■□□□□ 0.52
Gli1P47806 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Gli1P47806 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC18.31■□□□□ 0.52
Gli1P47806 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Gli1P47806 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Gli1P47806 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Gli1P47806 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Gli1P47806 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Gli1P47806 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Gli1P47806 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Gli1P47806 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Gli1P47806 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Gli1P47806 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Gli1P47806 Gm37352-201ENSMUST00000193908 2181 ntBASIC18.3■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 18.5 ms