Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Sox18P43680 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Sox18P43680 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Sox18P43680 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Sox18P43680 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Sox18P43680 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Sox18P43680 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Sox18P43680 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Sox18P43680 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Sox18P43680 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Sox18P43680 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Sox18P43680 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Sox18P43680 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC18.1■□□□□ 0.49
Sox18P43680 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Sox18P43680 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Sox18P43680 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Sox18P43680 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC18.1■□□□□ 0.49
Sox18P43680 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Sox18P43680 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Sox18P43680 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Sox18P43680 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Sox18P43680 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Sox18P43680 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Sox18P43680 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC18.09■□□□□ 0.49
Sox18P43680 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Sox18P43680 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Sox18P43680 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC18.09■□□□□ 0.49
Sox18P43680 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Sox18P43680 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Sox18P43680 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Sox18P43680 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Sox18P43680 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Sox18P43680 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Sox18P43680 Nrn1-203ENSMUST00000223611 1443 ntBASIC18.08■□□□□ 0.49
Sox18P43680 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
Sox18P43680 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Sox18P43680 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC18.08■□□□□ 0.48
Sox18P43680 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC18.08■□□□□ 0.48
Sox18P43680 Gm10819-201ENSMUST00000099988 561 ntBASIC18.08■□□□□ 0.48
Sox18P43680 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Sox18P43680 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Sox18P43680 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Sox18P43680 Gm37035-201ENSMUST00000194809 2148 ntBASIC18.07■□□□□ 0.48
Sox18P43680 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Sox18P43680 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC18.07■□□□□ 0.48
Sox18P43680 Gm21596-201ENSMUST00000178049 1316 ntBASIC18.07■□□□□ 0.48
Sox18P43680 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Sox18P43680 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC18.07■□□□□ 0.48
Sox18P43680 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC18.07■□□□□ 0.48
Sox18P43680 Gm15378-201ENSMUST00000121894 207 ntBASIC18.07■□□□□ 0.48
Sox18P43680 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Sox18P43680 Gm10231-201ENSMUST00000181584 441 ntBASIC18.07■□□□□ 0.48
Sox18P43680 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Sox18P43680 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC18.07■□□□□ 0.48
Sox18P43680 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Sox18P43680 Gm10175-202ENSMUST00000208752 441 ntBASIC18.07■□□□□ 0.48
Sox18P43680 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Sox18P43680 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Sox18P43680 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Sox18P43680 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Sox18P43680 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Sox18P43680 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC18.07■□□□□ 0.48
Sox18P43680 AC152827.1-201ENSMUST00000221143 2189 ntBASIC18.07■□□□□ 0.48
Sox18P43680 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Sox18P43680 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC18.07■□□□□ 0.48
Sox18P43680 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Sox18P43680 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Sox18P43680 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Sox18P43680 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Sox18P43680 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Sox18P43680 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Sox18P43680 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC18.06■□□□□ 0.48
Sox18P43680 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Sox18P43680 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Sox18P43680 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Sox18P43680 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Sox18P43680 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Sox18P43680 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Sox18P43680 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Sox18P43680 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Sox18P43680 Gm11249-201ENSMUST00000117071 859 ntBASIC18.05■□□□□ 0.48
Sox18P43680 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC18.05■□□□□ 0.48
Sox18P43680 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Sox18P43680 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC18.05■□□□□ 0.48
Sox18P43680 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Sox18P43680 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC18.05■□□□□ 0.48
Sox18P43680 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Sox18P43680 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Sox18P43680 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Sox18P43680 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Sox18P43680 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Sox18P43680 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Sox18P43680 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Sox18P43680 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC18.05■□□□□ 0.48
Sox18P43680 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Sox18P43680 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Sox18P43680 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Sox18P43680 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Sox18P43680 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC18.04■□□□□ 0.48
Sox18P43680 Gm6433-201ENSMUST00000118634 875 ntBASIC18.04■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms