Protein–RNA interactions for Protein: P39749

Fen1, Flap endonuclease 1, mousemouse

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fen1P39749 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Fen1P39749 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Fen1P39749 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC18.95■□□□□ 0.62
Fen1P39749 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Fen1P39749 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC18.95■□□□□ 0.62
Fen1P39749 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Fen1P39749 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Fen1P39749 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Fen1P39749 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Fen1P39749 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC18.94■□□□□ 0.62
Fen1P39749 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Fen1P39749 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Fen1P39749 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Fen1P39749 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Fen1P39749 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Fen1P39749 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Fen1P39749 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Fen1P39749 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC18.94■□□□□ 0.62
Fen1P39749 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Fen1P39749 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Fen1P39749 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Fen1P39749 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Fen1P39749 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Fen1P39749 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Fen1P39749 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Fen1P39749 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Fen1P39749 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Fen1P39749 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Fen1P39749 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Fen1P39749 Gm6085-201ENSMUST00000182774 1470 ntBASIC18.93■□□□□ 0.62
Fen1P39749 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC18.93■□□□□ 0.62
Fen1P39749 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Fen1P39749 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Fen1P39749 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Fen1P39749 Gm37352-201ENSMUST00000193908 2181 ntBASIC18.92■□□□□ 0.62
Fen1P39749 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Fen1P39749 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Fen1P39749 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Fen1P39749 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Fen1P39749 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Fen1P39749 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC18.92■□□□□ 0.62
Fen1P39749 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC18.92■□□□□ 0.62
Fen1P39749 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC18.92■□□□□ 0.62
Fen1P39749 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Fen1P39749 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Fen1P39749 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC18.92■□□□□ 0.62
Fen1P39749 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Fen1P39749 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC18.92■□□□□ 0.62
Fen1P39749 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Fen1P39749 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Fen1P39749 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Fen1P39749 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Fen1P39749 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Fen1P39749 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Fen1P39749 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Fen1P39749 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Fen1P39749 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Fen1P39749 BC021767-201ENSMUST00000126387 1716 ntBASIC18.91■□□□□ 0.62
Fen1P39749 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Fen1P39749 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Fen1P39749 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Fen1P39749 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Fen1P39749 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC18.91■□□□□ 0.62
Fen1P39749 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Fen1P39749 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Fen1P39749 Krt8-ps-201ENSMUST00000208495 945 ntBASIC18.91■□□□□ 0.62
Fen1P39749 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Fen1P39749 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Fen1P39749 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Fen1P39749 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Fen1P39749 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Fen1P39749 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Fen1P39749 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
Fen1P39749 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Fen1P39749 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Fen1P39749 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Fen1P39749 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Fen1P39749 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Fen1P39749 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC18.9■□□□□ 0.62
Fen1P39749 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
Fen1P39749 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Fen1P39749 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC18.9■□□□□ 0.62
Fen1P39749 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Fen1P39749 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Fen1P39749 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
Fen1P39749 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Fen1P39749 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Fen1P39749 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC18.9■□□□□ 0.62
Fen1P39749 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Fen1P39749 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Fen1P39749 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Fen1P39749 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Fen1P39749 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC18.9■□□□□ 0.62
Fen1P39749 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC18.9■□□□□ 0.62
Fen1P39749 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Fen1P39749 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
Fen1P39749 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC18.89■□□□□ 0.61
Fen1P39749 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC18.89■□□□□ 0.61
Fen1P39749 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Fen1P39749 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms