Protein–RNA interactions for Protein: P31649

Slc6a13, Sodium- and chloride-dependent GABA transporter 2, mousemouse

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a13P31649 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Slc6a13P31649 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Slc6a13P31649 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Slc6a13P31649 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Slc6a13P31649 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC19.21■□□□□ 0.67
Slc6a13P31649 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Slc6a13P31649 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Slc6a13P31649 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Slc6a13P31649 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
Slc6a13P31649 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Slc6a13P31649 Gm26571-201ENSMUST00000181399 666 ntBASIC19.21■□□□□ 0.67
Slc6a13P31649 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Slc6a13P31649 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC19.21■□□□□ 0.67
Slc6a13P31649 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Slc6a13P31649 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Slc6a13P31649 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Slc6a13P31649 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Slc6a13P31649 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Slc6a13P31649 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Slc6a13P31649 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Slc6a13P31649 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Slc6a13P31649 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Slc6a13P31649 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Slc6a13P31649 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Slc6a13P31649 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Slc6a13P31649 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Slc6a13P31649 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Slc6a13P31649 Gm5784-201ENSMUST00000179344 2478 ntBASIC19.19■□□□□ 0.66
Slc6a13P31649 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC19.19■□□□□ 0.66
Slc6a13P31649 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Slc6a13P31649 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Slc6a13P31649 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Slc6a13P31649 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Slc6a13P31649 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Slc6a13P31649 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Slc6a13P31649 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Slc6a13P31649 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Slc6a13P31649 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Slc6a13P31649 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
Slc6a13P31649 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Slc6a13P31649 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Slc6a13P31649 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Slc6a13P31649 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Slc6a13P31649 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC19.18■□□□□ 0.66
Slc6a13P31649 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Slc6a13P31649 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC19.18■□□□□ 0.66
Slc6a13P31649 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC19.18■□□□□ 0.66
Slc6a13P31649 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Slc6a13P31649 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Slc6a13P31649 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Slc6a13P31649 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Slc6a13P31649 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Slc6a13P31649 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC19.18■□□□□ 0.66
Slc6a13P31649 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Slc6a13P31649 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Slc6a13P31649 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Slc6a13P31649 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Slc6a13P31649 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Slc6a13P31649 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Slc6a13P31649 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Slc6a13P31649 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Slc6a13P31649 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Slc6a13P31649 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC19.17■□□□□ 0.66
Slc6a13P31649 Gm26971-201ENSMUST00000182423 1072 ntBASIC19.17■□□□□ 0.66
Slc6a13P31649 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC19.17■□□□□ 0.66
Slc6a13P31649 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Slc6a13P31649 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Slc6a13P31649 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Slc6a13P31649 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Slc6a13P31649 BC021767-201ENSMUST00000126387 1716 ntBASIC19.17■□□□□ 0.66
Slc6a13P31649 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Slc6a13P31649 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Slc6a13P31649 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Slc6a13P31649 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Slc6a13P31649 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC19.16■□□□□ 0.66
Slc6a13P31649 Gm13534-201ENSMUST00000121169 513 ntBASIC19.16■□□□□ 0.66
Slc6a13P31649 Gm8495-201ENSMUST00000188740 694 ntBASIC19.16■□□□□ 0.66
Slc6a13P31649 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC19.16■□□□□ 0.66
Slc6a13P31649 Ap3s1-204ENSMUST00000225520 957 ntBASIC19.16■□□□□ 0.66
Slc6a13P31649 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Slc6a13P31649 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Slc6a13P31649 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Slc6a13P31649 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Slc6a13P31649 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC19.16■□□□□ 0.66
Slc6a13P31649 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Slc6a13P31649 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC19.15■□□□□ 0.66
Slc6a13P31649 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Slc6a13P31649 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Slc6a13P31649 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Slc6a13P31649 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Slc6a13P31649 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Slc6a13P31649 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Slc6a13P31649 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Slc6a13P31649 Gm18671-201ENSMUST00000214826 683 ntBASIC19.15■□□□□ 0.66
Slc6a13P31649 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Slc6a13P31649 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Slc6a13P31649 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Slc6a13P31649 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
Slc6a13P31649 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Slc6a13P31649 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 42.4 ms