Protein–RNA interactions for Protein: P29595

Nedd8, NEDD8, mousemouse

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd8P29595 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Nedd8P29595 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Nedd8P29595 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
Nedd8P29595 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Nedd8P29595 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Nedd8P29595 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Nedd8P29595 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Nedd8P29595 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Nedd8P29595 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Nedd8P29595 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Nedd8P29595 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC17.51■□□□□ 0.39
Nedd8P29595 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Nedd8P29595 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Nedd8P29595 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Nedd8P29595 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Nedd8P29595 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Nedd8P29595 Gm27502-201ENSMUST00000183495 199 ntBASIC17.51■□□□□ 0.39
Nedd8P29595 Gm15853-202ENSMUST00000195518 2041 ntBASIC17.51■□□□□ 0.39
Nedd8P29595 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC17.51■□□□□ 0.39
Nedd8P29595 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Nedd8P29595 Gm43548-201ENSMUST00000197139 2353 ntBASIC17.51■□□□□ 0.39
Nedd8P29595 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Nedd8P29595 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Nedd8P29595 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Nedd8P29595 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Nedd8P29595 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Nedd8P29595 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Nedd8P29595 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Nedd8P29595 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Nedd8P29595 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Nedd8P29595 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Nedd8P29595 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Nedd8P29595 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Nedd8P29595 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Nedd8P29595 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Nedd8P29595 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC17.5■□□□□ 0.39
Nedd8P29595 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Nedd8P29595 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Nedd8P29595 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC17.5■□□□□ 0.39
Nedd8P29595 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Nedd8P29595 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Nedd8P29595 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC17.5■□□□□ 0.39
Nedd8P29595 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Nedd8P29595 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Nedd8P29595 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC17.49■□□□□ 0.39
Nedd8P29595 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Nedd8P29595 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Nedd8P29595 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Nedd8P29595 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Nedd8P29595 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
Nedd8P29595 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Nedd8P29595 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Nedd8P29595 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Nedd8P29595 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Nedd8P29595 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Nedd8P29595 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Nedd8P29595 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC17.48■□□□□ 0.39
Nedd8P29595 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Nedd8P29595 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Nedd8P29595 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Nedd8P29595 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
Nedd8P29595 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Nedd8P29595 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Nedd8P29595 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Nedd8P29595 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Nedd8P29595 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC17.48■□□□□ 0.39
Nedd8P29595 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
Nedd8P29595 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nedd8P29595 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nedd8P29595 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nedd8P29595 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC17.47■□□□□ 0.39
Nedd8P29595 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nedd8P29595 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nedd8P29595 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nedd8P29595 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nedd8P29595 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nedd8P29595 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nedd8P29595 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nedd8P29595 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nedd8P29595 Gm9954-202ENSMUST00000198686 4725 ntBASIC17.47■□□□□ 0.39
Nedd8P29595 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nedd8P29595 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nedd8P29595 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nedd8P29595 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Nedd8P29595 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Nedd8P29595 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Nedd8P29595 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Nedd8P29595 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Nedd8P29595 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Nedd8P29595 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Nedd8P29595 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Nedd8P29595 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Nedd8P29595 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Nedd8P29595 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC17.46■□□□□ 0.39
Nedd8P29595 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Nedd8P29595 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Nedd8P29595 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
Nedd8P29595 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Nedd8P29595 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Nedd8P29595 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 17.5 ms