Protein–RNA interactions for Protein: P28704

Rxrb, Retinoic acid receptor RXR-beta, mousemouse

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RxrbP28704 Gm5828-201ENSMUST00000071842 1860 ntBASIC19.02■□□□□ 0.64
RxrbP28704 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
RxrbP28704 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
RxrbP28704 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
RxrbP28704 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
RxrbP28704 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC19.02■□□□□ 0.64
RxrbP28704 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
RxrbP28704 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
RxrbP28704 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.63
RxrbP28704 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
RxrbP28704 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RxrbP28704 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
RxrbP28704 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
RxrbP28704 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RxrbP28704 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RxrbP28704 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RxrbP28704 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
RxrbP28704 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
RxrbP28704 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
RxrbP28704 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
RxrbP28704 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RxrbP28704 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
RxrbP28704 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RxrbP28704 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC19■□□□□ 0.63
RxrbP28704 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RxrbP28704 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RxrbP28704 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RxrbP28704 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC19■□□□□ 0.63
RxrbP28704 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
RxrbP28704 Rps24-207ENSMUST00000224568 714 ntBASIC19■□□□□ 0.63
RxrbP28704 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC19■□□□□ 0.63
RxrbP28704 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC19■□□□□ 0.63
RxrbP28704 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RxrbP28704 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RxrbP28704 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
RxrbP28704 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC19■□□□□ 0.63
RxrbP28704 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC19■□□□□ 0.63
RxrbP28704 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RxrbP28704 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
RxrbP28704 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RxrbP28704 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC18.99■□□□□ 0.63
RxrbP28704 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
RxrbP28704 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
RxrbP28704 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
RxrbP28704 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RxrbP28704 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RxrbP28704 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
RxrbP28704 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
RxrbP28704 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
RxrbP28704 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
RxrbP28704 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RxrbP28704 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
RxrbP28704 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RxrbP28704 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC18.98■□□□□ 0.63
RxrbP28704 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
RxrbP28704 Fst-202ENSMUST00000223640 2612 ntBASIC18.98■□□□□ 0.63
RxrbP28704 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RxrbP28704 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
RxrbP28704 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC18.97■□□□□ 0.63
RxrbP28704 Gm5898-201ENSMUST00000121016 2071 ntBASIC18.97■□□□□ 0.63
RxrbP28704 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
RxrbP28704 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC18.96■□□□□ 0.63
RxrbP28704 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
RxrbP28704 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
RxrbP28704 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC18.96■□□□□ 0.63
RxrbP28704 Gm8770-201ENSMUST00000121113 1109 ntBASIC18.96■□□□□ 0.63
RxrbP28704 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
RxrbP28704 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
RxrbP28704 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RxrbP28704 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RxrbP28704 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
RxrbP28704 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RxrbP28704 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RxrbP28704 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
RxrbP28704 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC18.95■□□□□ 0.62
RxrbP28704 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC18.95■□□□□ 0.62
RxrbP28704 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
RxrbP28704 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
RxrbP28704 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RxrbP28704 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RxrbP28704 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
RxrbP28704 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RxrbP28704 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RxrbP28704 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RxrbP28704 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
RxrbP28704 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RxrbP28704 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
RxrbP28704 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
RxrbP28704 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC18.94■□□□□ 0.62
RxrbP28704 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
RxrbP28704 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC18.93■□□□□ 0.62
RxrbP28704 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
RxrbP28704 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
RxrbP28704 Gm43548-201ENSMUST00000197139 2353 ntBASIC18.93■□□□□ 0.62
RxrbP28704 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RxrbP28704 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RxrbP28704 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RxrbP28704 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
RxrbP28704 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
RxrbP28704 Gm14117-201ENSMUST00000122417 843 ntBASIC18.93■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms