Protein–RNA interactions for Protein: P28660

Nckap1, Nck-associated protein 1, mousemouse

Known RBP Predictions only

Length 1,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nckap1P28660 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nckap1P28660 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Nckap1P28660 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nckap1P28660 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Nckap1P28660 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC18.79■□□□□ 0.6
Nckap1P28660 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nckap1P28660 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Nckap1P28660 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nckap1P28660 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Nckap1P28660 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC18.78■□□□□ 0.6
Nckap1P28660 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nckap1P28660 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Nckap1P28660 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
Nckap1P28660 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Nckap1P28660 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
Nckap1P28660 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Nckap1P28660 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nckap1P28660 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nckap1P28660 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC18.77■□□□□ 0.6
Nckap1P28660 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Nckap1P28660 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Nckap1P28660 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Nckap1P28660 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Nckap1P28660 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Nckap1P28660 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Nckap1P28660 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Nckap1P28660 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC18.77■□□□□ 0.6
Nckap1P28660 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Nckap1P28660 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Nckap1P28660 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Nckap1P28660 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Nckap1P28660 Gm10616-201ENSMUST00000205285 2127 ntBASIC18.77■□□□□ 0.6
Nckap1P28660 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC18.77■□□□□ 0.59
Nckap1P28660 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Nckap1P28660 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Nckap1P28660 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Nckap1P28660 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Nckap1P28660 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Nckap1P28660 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Nckap1P28660 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC18.76■□□□□ 0.59
Nckap1P28660 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
Nckap1P28660 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC18.76■□□□□ 0.59
Nckap1P28660 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC18.76■□□□□ 0.59
Nckap1P28660 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Nckap1P28660 Gm8520-201ENSMUST00000186517 868 ntBASIC18.76■□□□□ 0.59
Nckap1P28660 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC18.76■□□□□ 0.59
Nckap1P28660 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Nckap1P28660 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Nckap1P28660 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Nckap1P28660 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Nckap1P28660 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Nckap1P28660 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Nckap1P28660 Gm12527-201ENSMUST00000117967 564 ntBASIC18.75■□□□□ 0.59
Nckap1P28660 AC122769.4-201ENSMUST00000228166 901 ntBASIC18.75■□□□□ 0.59
Nckap1P28660 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Nckap1P28660 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Nckap1P28660 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Nckap1P28660 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Nckap1P28660 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Nckap1P28660 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC18.75■□□□□ 0.59
Nckap1P28660 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Nckap1P28660 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Nckap1P28660 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Nckap1P28660 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Nckap1P28660 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC18.74■□□□□ 0.59
Nckap1P28660 Gm22240-201ENSMUST00000175225 82 ntBASIC18.74■□□□□ 0.59
Nckap1P28660 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Nckap1P28660 Gm20049-201ENSMUST00000219950 730 ntBASIC18.74■□□□□ 0.59
Nckap1P28660 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Nckap1P28660 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Nckap1P28660 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Nckap1P28660 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Nckap1P28660 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Nckap1P28660 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Nckap1P28660 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Nckap1P28660 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Nckap1P28660 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Nckap1P28660 Gm32699-201ENSMUST00000221728 1988 ntBASIC18.73■□□□□ 0.59
Nckap1P28660 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Nckap1P28660 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Nckap1P28660 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Nckap1P28660 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Nckap1P28660 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Nckap1P28660 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Nckap1P28660 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Nckap1P28660 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Nckap1P28660 Gm44672-201ENSMUST00000206944 1098 ntBASIC18.73■□□□□ 0.59
Nckap1P28660 Rab3c-203ENSMUST00000224180 967 ntBASIC18.73■□□□□ 0.59
Nckap1P28660 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Nckap1P28660 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Nckap1P28660 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Nckap1P28660 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Nckap1P28660 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Nckap1P28660 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Nckap1P28660 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Nckap1P28660 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC18.72■□□□□ 0.59
Nckap1P28660 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Nckap1P28660 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Nckap1P28660 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Nckap1P28660 Iqck-206ENSMUST00000208658 2891 ntBASIC18.71■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms